Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54783329 . A C CCDS12886.1:NM_005874.3:c.529Tcc>Gcc_NP_005865.2:p.177S>A Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aed 1 Q8N423 99.24 0.0 X-RAY
2019-07-31 SER A:154 A:155 48.0 0.417 E -84.9 -22.9 48.0 0.417 0.0
6zdx 2 A0A0G2JQ46 80.15 0.0 X-RAY
2020-07-22 SER B:186 B:155 37.0 0.322 T -137.1 2.4 37.0 0.322 0.0
6aee 4 A0A0G2JQ44 80.61 0.0 X-RAY
2019-07-31 SER G:154 G:155 30.0 0.261 -117.0 40.9 30.0 0.261 0.0
SER H:154 H:155 47.0 0.409 -99.0 17.0 NA NA NA
6bcs 1 A0A0G2JNQ7 99.49 3e-141 X-RAY
2018-09-05 SER A:155 A:155 57.0 0.496 E -112.6 13.6 57.0 0.496 0.0 BEN
CL
HOH
8.666
8.687
3.217
CA
C
N
C6
CL
O
2gw5 1 Q8N423 99.49 5e-141 X-RAY
2006-06-20 SER A:154 A:155 49.0 0.426 E -95.5 -1.2 49.0 0.426 0.0 HOH
2.778
N
O
2dyp 4 Q8N423 98.98 3e-139 X-RAY
2006-11-07 SER D:154 D:154 36.0 0.313 -131.8 -23.6 13.0 0.113 0.2 B:P61769:0.2
HOH
4.042
CB
O
1ugn 1 Q8NHL6 81.31 7e-105 X-RAY
2004-08-10 SER A:155 A:155 38.0 0.33 -128.6 29.4 38.0 0.33 0.0 HOH
6.085
O
O
3d2u 3 Q8NHL6 80.81 3e-104 X-RAY
2008-07-08 SER C:155 D:155 82.0 0.713 360.0 98.4 73.0 0.635 0.078 B:P61769:0.078
HOH
6.602
CB
O
SER F:155 NA:NA DO NA DO DO DO NA NA NA
6k60 4 A0A0G2JQ44 81.12 6e-104 X-RAY
2019-11-27 SER D:156 D:155 24.0 0.209 -152.2 92.1 15.0 0.13 0.079 B:P61769:0.078
SER H:156 NA:NA DO NA DO DO DO NA NA NA
1g0x 1 Q8NHL6 81.12 1e-103 X-RAY
2001-01-17 SER A:154 A:155 36.0 0.313 T -140.8 34.0 36.0 0.313 0.0 HOH
2.610
OG
O
1p7q 4 Q8NHL6 81.12 1e-103 X-RAY
2003-10-14 SER D:154 D:155 19.0 0.165 -122.3 60.6 19.0 0.165 0.0
1ufu 1 Q8NHL6 81.12 1e-103 X-RAY
2004-08-10 SER A:154 A:155 39.0 0.339 -125.6 20.3 39.0 0.339 0.0
4no0 4 Q8NHL6 81.54 2e-103 X-RAY
2014-11-19 SER D:152 D:155 21.0 0.183 61.7 33.8 21.0 0.183 0.0 HOH
7.519
OG
O
6ewa 4 D9IDM8 81.54 2e-103 X-RAY
2018-11-07 SER D:152 D:155 23.0 0.2 55.3 45.5 11.0 0.096 0.104 B:P61769:0.104
HOH
7.174
OG
O
SER H:152 H:155 22.0 0.191 77.6 46.5 NA NA NA
6ewc 4 A0A0G2JQ44 81.54 2e-103 X-RAY
2018-11-07 SER D:152 D:155 17.0 0.148 S 63.8 48.9 6.0 0.052 0.096 B:P61769:0.096
SER H:152 H:155 19.0 0.165 64.2 49.5 NA NA NA
6ewo 4 D9IDM8 81.54 2e-103 X-RAY
2018-11-07 SER D:152 D:155 20.0 0.174 56.8 33.9 9.0 0.078 0.096 B:P61769:0.096
HOH
3.401
O
O
SER H:152 H:155 17.0 0.148 71.7 45.2 NA NA NA
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
2005-08-02 SER A:155 A:155 11.0 0.096 S 78.6 74.7 11.0 0.096 0.0 HOH
3.616
O
O
SER B:155 B:155 37.0 0.322 S 49.0 4.0 37.0 0.322 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n423-f1 1 Q8N423 100.0 0.0 SER A:177 A:177 52.0 0.452 E -74.0 -0.7
af-o75019-f1 1 O75019 84.62 0.0 SER A:178 A:178 54.0 0.47 E -75.7 8.1
af-q8n6c8-f1 1 Q8N6C8 81.12 0.0 SER A:178 A:178 65.0 0.565 E -88.9 5.5