Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 54783329 | . | A | C | CCDS12886.1:NM_005874.3:c.529Tcc>Gcc_NP_005865.2:p.177S>A | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6aed | 1 | Q8N423 | 99.24 | 0.0 |
X-RAY |
2019-07-31 | SER | A:154 | A:155 | 48.0 | 0.417 | E | -84.9 | -22.9 | 48.0 | 0.417 | 0.0 | ||||||
6zdx | 2 | A0A0G2JQ46 | 80.15 | 0.0 |
X-RAY |
2020-07-22 | SER | B:186 | B:155 | 37.0 | 0.322 | T | -137.1 | 2.4 | 37.0 | 0.322 | 0.0 | ||||||
6aee | 4 | A0A0G2JQ44 | 80.61 | 0.0 |
X-RAY |
2019-07-31 | SER | G:154 | G:155 | 30.0 | 0.261 | -117.0 | 40.9 | 30.0 | 0.261 | 0.0 | |||||||
SER | H:154 | H:155 | 47.0 | 0.409 | -99.0 | 17.0 | NA | NA | NA | ||||||||||||||
6bcs | 1 | A0A0G2JNQ7 | 99.49 | 3e-141 |
X-RAY |
2018-09-05 | SER | A:155 | A:155 | 57.0 | 0.496 | E | -112.6 | 13.6 | 57.0 | 0.496 | 0.0 |
BEN CL HOH |
8.666 8.687 3.217 |
CA C N |
C6 CL O |
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2gw5 | 1 | Q8N423 | 99.49 | 5e-141 |
X-RAY |
2006-06-20 | SER | A:154 | A:155 | 49.0 | 0.426 | E | -95.5 | -1.2 | 49.0 | 0.426 | 0.0 |
HOH |
2.778 |
N |
O |
||
2dyp | 4 | Q8N423 | 98.98 | 3e-139 |
X-RAY |
2006-11-07 | SER | D:154 | D:154 | 36.0 | 0.313 | -131.8 | -23.6 | 13.0 | 0.113 | 0.2 |
B:P61769:0.2 |
HOH |
4.042 |
CB |
O |
||
1ugn | 1 | Q8NHL6 | 81.31 | 7e-105 |
X-RAY |
2004-08-10 | SER | A:155 | A:155 | 38.0 | 0.33 | -128.6 | 29.4 | 38.0 | 0.33 | 0.0 |
HOH |
6.085 |
O |
O |
|||
3d2u | 3 | Q8NHL6 | 80.81 | 3e-104 |
X-RAY |
2008-07-08 | SER | C:155 | D:155 | 82.0 | 0.713 | 360.0 | 98.4 | 73.0 | 0.635 | 0.078 |
B:P61769:0.078 |
HOH |
6.602 |
CB |
O |
||
SER | F:155 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
6k60 | 4 | A0A0G2JQ44 | 81.12 | 6e-104 |
X-RAY |
2019-11-27 | SER | D:156 | D:155 | 24.0 | 0.209 | -152.2 | 92.1 | 15.0 | 0.13 | 0.079 |
B:P61769:0.078 |
||||||
SER | H:156 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
1g0x | 1 | Q8NHL6 | 81.12 | 1e-103 |
X-RAY |
2001-01-17 | SER | A:154 | A:155 | 36.0 | 0.313 | T | -140.8 | 34.0 | 36.0 | 0.313 | 0.0 |
HOH |
2.610 |
OG |
O |
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1p7q | 4 | Q8NHL6 | 81.12 | 1e-103 |
X-RAY |
2003-10-14 | SER | D:154 | D:155 | 19.0 | 0.165 | -122.3 | 60.6 | 19.0 | 0.165 | 0.0 | |||||||
1ufu | 1 | Q8NHL6 | 81.12 | 1e-103 |
X-RAY |
2004-08-10 | SER | A:154 | A:155 | 39.0 | 0.339 | -125.6 | 20.3 | 39.0 | 0.339 | 0.0 | |||||||
4no0 | 4 | Q8NHL6 | 81.54 | 2e-103 |
X-RAY |
2014-11-19 | SER | D:152 | D:155 | 21.0 | 0.183 | 61.7 | 33.8 | 21.0 | 0.183 | 0.0 |
HOH |
7.519 |
OG |
O |
|||
6ewa | 4 | D9IDM8 | 81.54 | 2e-103 |
X-RAY |
2018-11-07 | SER | D:152 | D:155 | 23.0 | 0.2 | 55.3 | 45.5 | 11.0 | 0.096 | 0.104 |
B:P61769:0.104 |
HOH |
7.174 |
OG |
O |
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SER | H:152 | H:155 | 22.0 | 0.191 | 77.6 | 46.5 | NA | NA | NA | ||||||||||||||
6ewc | 4 | A0A0G2JQ44 | 81.54 | 2e-103 |
X-RAY |
2018-11-07 | SER | D:152 | D:155 | 17.0 | 0.148 | S | 63.8 | 48.9 | 6.0 | 0.052 | 0.096 |
B:P61769:0.096 |
|||||
SER | H:152 | H:155 | 19.0 | 0.165 | 64.2 | 49.5 | NA | NA | NA | ||||||||||||||
6ewo | 4 | D9IDM8 | 81.54 | 2e-103 |
X-RAY |
2018-11-07 | SER | D:152 | D:155 | 20.0 | 0.174 | 56.8 | 33.9 | 9.0 | 0.078 | 0.096 |
B:P61769:0.096 |
HOH |
3.401 |
O |
O |
||
SER | H:152 | H:155 | 17.0 | 0.148 | 71.7 | 45.2 | NA | NA | NA | ||||||||||||||
1vdg | 1 | Q8NHL6 | 80.1 | 3e-102 |
X-RAY |
2005-08-02 | SER | A:155 | A:155 | 11.0 | 0.096 | S | 78.6 | 74.7 | 11.0 | 0.096 | 0.0 |
HOH |
3.616 |
O |
O |
||
SER | B:155 | B:155 | 37.0 | 0.322 | S | 49.0 | 4.0 | 37.0 | 0.322 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8n423-f1 | 1 | Q8N423 | 100.0 | 0.0 | SER | A:177 | A:177 | 52.0 | 0.452 | E | -74.0 | -0.7 | |
af-o75019-f1 | 1 | O75019 | 84.62 | 0.0 | SER | A:178 | A:178 | 54.0 | 0.47 | E | -75.7 | 8.1 | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 81.12 | 0.0 | SER | A:178 | A:178 | 65.0 | 0.565 | E | -88.9 | 5.5 |