Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54783331 . G A CCDS12886.1:NM_005874.3:c.527tCg>tTg_NP_005865.2:p.176S>L Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aed 1 Q8N423 99.24 0.0 X-RAY
 2019-07-31 SER A:153 A:154 38.0 0.33 E -105.0 163.0 38.0 0.33 0.0
6zdx 2 A0A0G2JQ46 80.15 0.0 X-RAY
 2020-07-22 SER B:185 B:154 62.0 0.539 G 57.1 16.3 62.0 0.539 0.0
6aee 4 A0A0G2JQ44 80.61 0.0 X-RAY
 2019-07-31 SER G:153 G:154 132.0 1.0 360.0 -34.6 108.0 0.939 0.061 B:P61769:0.209
SER H:153 H:154 117.0 1.0 360.0 -43.9 NA NA NA
6bcs 1 A0A0G2JNQ7 99.49 3e-141 X-RAY
 2018-09-05 SER A:154 A:154 20.0 0.174 E -152.9 159.8 20.0 0.174 0.0 BEN
CL
HOH
 7.184
6.352
3.266
 O
OG
OG
 N2
CL
O
2gw5 1 Q8N423 99.49 5e-141 X-RAY
 2006-06-20 SER A:153 A:154 27.0 0.235 E -140.9 158.6 27.0 0.235 0.0 HOH
 2.570
 OG
 O
2dyp 4 Q8N423 98.98 3e-139 X-RAY
 2006-11-07 SER D:153 D:153 74.0 0.643 360.0 166.6 59.0 0.513 0.13 B:P61769:0.13
 HOH
 5.197
 C
 O
1ugn 1 Q8NHL6 81.31 7e-105 X-RAY
 2004-08-10 SER A:154 A:154 127.0 1.0 360.0 5.5 127.0 1.0 0.0 HOH
 7.125
 O
 O
3d2u 3 Q8NHL6 80.81 3e-104 X-RAY
 2008-07-08 SER C:154 NA:NA DO NA DO DO DO NA NA NA
SER F:154 NA:NA DO NA DO DO DO NA NA NA
6k60 4 A0A0G2JQ44 81.12 6e-104 X-RAY
 2019-11-27 SER D:155 D:154 134.0 1.0 360.0 -149.6 134.0 1.0 0.0
SER H:155 NA:NA DO NA DO DO DO NA NA NA
1g0x 1 Q8NHL6 81.12 1e-103 X-RAY
 2001-01-17 SER A:153 A:154 93.0 0.809 T -64.3 -30.2 93.0 0.809 0.0 HOH
 2.568
 O
 O
1p7q 4 Q8NHL6 81.12 1e-103 X-RAY
 2003-10-14 SER D:153 D:154 42.0 0.365 -87.9 146.7 42.0 0.365 0.0
1ufu 1 Q8NHL6 81.12 1e-103 X-RAY
 2004-08-10 SER A:153 A:154 118.0 1.0 360.0 -31.7 118.0 1.0 0.0
4no0 4 Q8NHL6 81.54 2e-103 X-RAY
 2014-11-19 SER D:151 D:154 34.0 0.296 -94.4 -55.5 34.0 0.296 0.0 HOH
 5.715
 OG
 O
6ewa 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 SER D:151 D:154 40.0 0.348 -87.8 -29.4 36.0 0.313 0.035 B:P61769:0.035
 HOH
 9.914
 O
 O
SER H:151 H:154 46.0 0.4 T -83.3 -54.5 NA NA NA
6ewc 4 A0A0G2JQ44 81.54 2e-103 X-RAY
 2018-11-07 SER D:151 D:154 50.0 0.435 -68.4 -30.1 45.0 0.391 0.044 B:P61769:0.043
SER H:151 H:154 40.0 0.348 -86.4 -39.8 NA NA NA
6ewo 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 SER D:151 D:154 40.0 0.348 -90.7 -26.9 37.0 0.322 0.026 B:P61769:0.026
 HOH
 4.199
 O
 O
SER H:151 H:154 52.0 0.452 -88.9 -62.2 NA NA NA
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 SER A:154 A:154 107.0 0.93 S -91.3 75.9 107.0 0.93 0.0 HOH
 3.199
 OG
 O
SER B:154 B:154 85.0 0.739 S -178.5 154.2 85.0 0.739 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n423-f1 1 Q8N423 100.0 0.0 SER A:176 A:176 27.0 0.235 E -75.6 129.3
af-o75019-f1 1 O75019 84.62 0.0 TRP A:177 A:177 110.0 0.431 E -91.3 141.1
af-q8n6c8-f1 1 Q8N6C8 81.12 0.0 SER A:177 A:177 25.0 0.217 E -66.2 132.7