Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54783385 . T A CCDS12886.1:NM_005874.3:c.473gAa>gTa_NP_005865.2:p.158E>V Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aed 1 Q8N423 99.24 0.0 X-RAY
2019-07-31 GLU A:135 A:136 113.0 0.595 -131.3 360.0 113.0 0.595 0.0
6zdx 2 A0A0G2JQ46 80.15 0.0 X-RAY
2020-07-22 GLU B:167 B:136 53.0 0.279 E -118.3 147.1 53.0 0.279 0.0
6aee 4 A0A0G2JQ44 80.61 0.0 X-RAY
2019-07-31 GLU G:135 G:136 61.0 0.321 E -81.1 -170.6 61.0 0.321 0.0
GLU H:135 H:136 143.0 0.753 -89.2 360.0 NA NA NA
6bcs 1 A0A0G2JNQ7 99.49 3e-141 X-RAY
2018-09-05 GLU A:136 A:136 58.0 NA E -129.5 138.7 58.0 NA NA BEN
7.366
CB
N2
2gw5 1 Q8N423 99.49 5e-141 X-RAY
2006-06-20 GLU A:135 A:136 115.0 0.605 -108.9 360.0 115.0 0.605 0.0 HOH
2.515
O
O
2dyp 4 Q8N423 98.98 3e-139 X-RAY
2006-11-07 GLU D:135 D:135 95.0 0.5 -129.1 360.0 95.0 0.5 0.0 HOH
6.657
O
O
1ugn 1 Q8NHL6 81.31 7e-105 X-RAY
2004-08-10 GLU A:136 A:136 103.0 0.542 -82.5 360.0 103.0 0.542 0.0 HOH
2.845
OE2
O
3d2u 3 Q8NHL6 80.81 3e-104 X-RAY
2008-07-08 GLU C:136 D:136 90.0 0.474 -119.7 360.0 90.0 0.474 0.0 HOH
7.297
N
O
GLU F:136 H:136 78.0 0.411 E -126.0 167.9 NA NA NA
6k60 4 A0A0G2JQ44 81.12 6e-104 X-RAY
2019-11-27 GLU D:137 D:136 114.0 0.6 -76.4 360.0 114.0 0.6 0.0
GLU H:137 NA:NA DO NA DO DO DO NA NA NA
1g0x 1 Q8NHL6 81.12 1e-103 X-RAY
2001-01-17 GLU A:135 A:136 37.0 0.195 -67.0 106.5 37.0 0.195 0.0 HOH
2.709
OE2
O
1p7q 4 Q8NHL6 81.12 1e-103 X-RAY
2003-10-14 GLU D:135 D:136 59.0 0.311 -68.6 -35.8 59.0 0.311 0.0
1ufu 1 Q8NHL6 81.12 1e-103 X-RAY
2004-08-10 GLU A:135 A:136 114.0 0.6 -26.6 360.0 114.0 0.6 0.0
4no0 4 Q8NHL6 81.54 2e-103 X-RAY
2014-11-19 GLU D:133 D:136 53.0 0.279 E -75.9 172.7 53.0 0.279 0.0 HOH
6.222
OE1
O
6ewa 4 D9IDM8 81.54 2e-103 X-RAY
2018-11-07 GLU D:133 D:136 56.0 0.295 E -107.0 153.2 56.0 0.295 0.0 HOH
7.490
OE2
O
GLU H:133 H:136 59.0 0.311 E -143.8 150.9 NA NA NA
6ewc 4 A0A0G2JQ44 81.54 2e-103 X-RAY
2018-11-07 GLU D:133 D:136 68.0 0.358 E -115.1 169.6 68.0 0.358 0.0
GLU H:133 H:136 69.0 0.363 E -112.0 165.5 NA NA NA
6ewo 4 D9IDM8 81.54 2e-103 X-RAY
2018-11-07 GLU D:133 D:136 105.0 0.553 53.2 125.6 105.0 0.553 0.0 HOH
4.680
O
O
GLU H:133 H:136 62.0 0.326 E -147.2 158.5 NA NA NA
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
2005-08-02 GLU A:136 A:136 106.0 0.558 -70.2 360.0 106.0 0.558 0.0 HOH
3.417
OE1
O
GLU B:136 B:136 102.0 0.537 -58.6 360.0 102.0 0.537 0.0 HOH
2.944
OE2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n423-f1 1 Q8N423 100.0 0.0 GLU A:158 A:158 43.0 0.226 E -99.8 140.1
af-o75019-f1 1 O75019 84.62 0.0 GLU A:159 A:159 45.0 0.237 E -99.3 133.5
af-q8n6c8-f1 1 Q8N6C8 81.12 0.0 GLU A:159 A:159 43.0 0.226 E -100.6 131.1