Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54783406 . C A CCDS12886.1:NM_005874.3:c.452gGc>gTc_NP_005865.2:p.151G>V Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aed 1 Q8N423 99.24 0.0 X-RAY
 2019-07-31 GLY A:128 A:129 6.0 0.08 S -75.0 -43.1 6.0 0.08 0.0
6zdx 2 A0A0G2JQ46 80.15 0.0 X-RAY
 2020-07-22 ASP B:160 B:129 61.0 0.407 S -92.8 6.0 61.0 0.407 0.0
6aee 4 A0A0G2JQ44 80.61 0.0 X-RAY
 2019-07-31 ASP G:128 G:129 83.0 0.553 S -111.0 16.9 83.0 0.553 0.0
ASP H:128 H:129 85.0 0.567 S -117.1 7.0 NA NA NA
6bcs 1 A0A0G2JNQ7 99.49 3e-141 X-RAY
 2018-09-05 GLY A:129 A:129 9.0 0.12 S -65.7 -39.9 9.0 0.12 0.0 BEN
BEN
CL
HOH
 5.047
8.529
9.561
2.724
 N
C
O
O
 N2
C5
CL
O
2gw5 1 Q8N423 99.49 5e-141 X-RAY
 2006-06-20 GLY A:128 A:129 12.0 0.16 S -62.4 -35.7 12.0 0.16 0.0 HOH
 2.947
 N
 O
2dyp 4 Q8N423 98.98 3e-139 X-RAY
 2006-11-07 GLY D:128 D:128 24.0 0.32 S -79.7 -8.0 24.0 0.32 0.0 HOH
 5.655
 N
 O
1ugn 1 Q8NHL6 81.31 7e-105 X-RAY
 2004-08-10 ASP A:129 A:129 85.0 0.567 S -95.7 2.9 85.0 0.567 0.0 HOH
 2.623
 OD2
 O
3d2u 3 Q8NHL6 80.81 3e-104 X-RAY
 2008-07-08 ASP C:129 D:129 94.0 0.627 S -105.6 -4.2 94.0 0.627 0.0 HOH
 2.837
 OD1
 O
ASP F:129 H:129 84.0 0.56 S -106.2 -10.7 NA NA NA
6k60 4 A0A0G2JQ44 81.12 6e-104 X-RAY
 2019-11-27 ASP D:130 D:129 66.0 0.44 S -103.3 45.3 66.0 0.44 0.0
ASP H:130 H:129 141.0 0.94 S -89.3 2.5 NA NA NA
1g0x 1 Q8NHL6 81.12 1e-103 X-RAY
 2001-01-17 ASP A:128 A:129 81.0 0.54 S -84.0 4.0 81.0 0.54 0.0 HOH
 2.598
 OD2
 O
1p7q 4 Q8NHL6 81.12 1e-103 X-RAY
 2003-10-14 ASP D:128 D:129 65.0 0.433 S -125.8 17.5 65.0 0.433 0.0
1ufu 1 Q8NHL6 81.12 1e-103 X-RAY
 2004-08-10 ASP A:128 A:129 93.0 0.62 S -84.2 25.1 93.0 0.62 0.0
4no0 4 Q8NHL6 81.54 2e-103 X-RAY
 2014-11-19 ASP D:126 D:129 65.0 0.433 S -139.8 15.4 65.0 0.433 0.0 HOH
 3.388
 O
 O
6ewa 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 ASP D:126 D:129 65.0 0.433 S -110.4 1.7 65.0 0.433 0.0 HOH
 3.326
 O
 O
ASP H:126 H:129 72.0 0.48 S -112.7 -3.6 NA NA NA
6ewc 4 A0A0G2JQ44 81.54 2e-103 X-RAY
 2018-11-07 ASP D:126 D:129 62.0 0.413 S -119.2 1.5 62.0 0.413 0.0
ASP H:126 H:129 63.0 0.42 S -120.5 2.1 NA NA NA
6ewo 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 ASP D:126 D:129 67.0 0.447 S -110.9 2.9 67.0 0.447 0.0 HOH
 7.084
 OD1
 O
ASP H:126 H:129 64.0 0.427 S -115.1 3.4 NA NA NA
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 ASP A:129 A:129 63.0 0.42 S -97.3 -0.6 44.0 0.293 0.127 B:Q8NHL6:0.127
 HOH
 8.224
 CA
 O
ASP B:129 B:129 66.0 0.44 S -96.8 5.2 52.0 0.347 0.093 A:Q8NHL6:0.093
 HOH
 6.458
 OD2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n423-f1 1 Q8N423 100.0 0.0 GLY A:151 A:151 15.0 0.2 S -73.2 -31.2
af-o75019-f1 1 O75019 84.62 0.0 GLY A:152 A:152 27.0 0.36 S -73.3 -33.7
af-q8n6c8-f1 1 Q8N6C8 81.12 0.0 ASP A:152 A:152 19.0 0.127 S -81.6 -22.4