Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 54783423 | . | C | A | CCDS12886.1:NM_005874.3:c.435gaG>gaT_NP_005865.2:p.145E>D | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6aed | 1 | Q8N423 | 99.24 | 0.0 |
X-RAY |
2019-07-31 | GLU | A:122 | A:123 | 97.0 | 0.511 | E | -124.9 | 148.9 | 97.0 | 0.511 | 0.0 | ||||||
6zdx | 2 | A0A0G2JQ46 | 80.15 | 0.0 |
X-RAY |
2020-07-22 | ASP | B:154 | B:123 | 33.0 | 0.22 | E | -126.3 | 139.6 | 33.0 | 0.22 | 0.0 | ||||||
6aee | 4 | A0A0G2JQ44 | 80.61 | 0.0 |
X-RAY |
2019-07-31 | ASP | G:122 | G:123 | 29.0 | 0.193 | E | -100.9 | 157.0 | 29.0 | 0.193 | 0.0 | ||||||
ASP | H:122 | H:123 | 41.0 | 0.273 | E | -106.9 | 150.9 | NA | NA | NA | |||||||||||||
6bcs | 1 | A0A0G2JNQ7 | 99.49 | 3e-141 |
X-RAY |
2018-09-05 | GLU | A:123 | A:123 | 91.0 | 0.479 | E | -131.7 | 148.5 | 91.0 | 0.479 | 0.0 |
BEN CL HOH |
8.816 9.971 3.792 |
O N OE2 |
C5 CL O |
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2gw5 | 1 | Q8N423 | 99.49 | 5e-141 |
X-RAY |
2006-06-20 | GLU | A:122 | A:123 | 83.0 | 0.437 | E | -136.7 | 139.1 | 83.0 | 0.437 | 0.0 |
HOH |
2.632 |
OE2 |
O |
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2dyp | 4 | Q8N423 | 98.98 | 3e-139 |
X-RAY |
2006-11-07 | GLU | D:122 | D:122 | 80.0 | 0.421 | E | -134.4 | 149.8 | 80.0 | 0.421 | 0.0 |
HOH |
4.340 |
O |
O |
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1ugn | 1 | Q8NHL6 | 81.31 | 7e-105 |
X-RAY |
2004-08-10 | ASP | A:123 | A:123 | 55.0 | 0.367 | E | -114.2 | 135.4 | 55.0 | 0.367 | 0.0 |
HOH |
2.637 |
O |
O |
||
3d2u | 3 | Q8NHL6 | 80.81 | 3e-104 |
X-RAY |
2008-07-08 | ASP | C:123 | D:123 | 55.0 | 0.367 | E | -114.0 | 136.0 | 55.0 | 0.367 | 0.0 |
HOH |
2.518 |
OD2 |
O |
||
ASP | F:123 | H:123 | 55.0 | 0.367 | E | -107.8 | 135.9 | NA | NA | NA | |||||||||||||
6k60 | 4 | A0A0G2JQ44 | 81.12 | 6e-104 |
X-RAY |
2019-11-27 | ASP | D:124 | D:123 | 67.0 | 0.447 | B | -93.4 | 138.1 | 67.0 | 0.447 | 0.0 | ||||||
ASP | H:124 | H:123 | 138.0 | 0.92 | -143.8 | 105.3 | NA | NA | NA | ||||||||||||||
1g0x | 1 | Q8NHL6 | 81.12 | 1e-103 |
X-RAY |
2001-01-17 | ASP | A:122 | A:123 | 27.0 | 0.18 | E | -112.5 | 134.9 | 27.0 | 0.18 | 0.0 |
HOH |
2.661 |
OD1 |
O |
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1p7q | 4 | Q8NHL6 | 81.12 | 1e-103 |
X-RAY |
2003-10-14 | ASP | D:122 | D:123 | 53.0 | 0.353 | E | -98.0 | 150.1 | 53.0 | 0.353 | 0.0 | ||||||
1ufu | 1 | Q8NHL6 | 81.12 | 1e-103 |
X-RAY |
2004-08-10 | ASP | A:122 | A:123 | 67.0 | 0.447 | E | -120.6 | 138.4 | 67.0 | 0.447 | 0.0 | ||||||
4no0 | 4 | Q8NHL6 | 81.54 | 2e-103 |
X-RAY |
2014-11-19 | ASP | D:120 | D:123 | 42.0 | 0.28 | E | -118.2 | 113.0 | 42.0 | 0.28 | 0.0 |
HOH |
6.206 |
OD2 |
O |
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6ewa | 4 | D9IDM8 | 81.54 | 2e-103 |
X-RAY |
2018-11-07 | ASP | D:120 | D:123 | 41.0 | 0.273 | E | -104.1 | 124.9 | 41.0 | 0.273 | 0.0 |
HOH |
4.323 |
O |
O |
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ASP | H:120 | H:123 | 33.0 | 0.22 | E | -121.4 | 120.9 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 81.54 | 2e-103 |
X-RAY |
2018-11-07 | ASP | D:120 | D:123 | 40.0 | 0.267 | E | -116.1 | 126.8 | 40.0 | 0.267 | 0.0 | ||||||
ASP | H:120 | H:123 | 57.0 | 0.38 | E | -116.0 | 129.4 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 81.54 | 2e-103 |
X-RAY |
2018-11-07 | ASP | D:120 | D:123 | 34.0 | 0.227 | E | -114.6 | 121.6 | 34.0 | 0.227 | 0.0 |
HOH |
2.706 |
OD2 |
O |
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ASP | H:120 | H:123 | 33.0 | 0.22 | E | -116.9 | 128.3 | NA | NA | NA | |||||||||||||
1vdg | 1 | Q8NHL6 | 80.1 | 3e-102 |
X-RAY |
2005-08-02 | ASP | A:123 | A:123 | 39.0 | 0.26 | E | -108.1 | 131.9 | 39.0 | 0.26 | 0.0 |
HOH |
2.765 |
OD2 |
O |
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ASP | B:123 | B:123 | 48.0 | 0.32 | E | -113.0 | 142.2 | 48.0 | 0.32 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8n423-f1 | 1 | Q8N423 | 100.0 | 0.0 | GLU | A:145 | A:145 | 81.0 | 0.426 | E | -135.9 | 143.0 | |
af-o75019-f1 | 1 | O75019 | 84.62 | 0.0 | VAL | A:146 | A:146 | 42.0 | 0.271 | E | -128.4 | 141.2 | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 81.12 | 0.0 | ASP | A:146 | A:146 | 33.0 | 0.22 | E | -115.7 | 146.4 |