Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54783442 . C A CCDS12886.1:NM_005874.3:c.416aGg>aTg_NP_005865.2:p.139R>M Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aed 1 Q8N423 99.24 0.0 X-RAY
 2019-07-31 ARG A:116 A:117 147.0 0.653 -95.1 121.1 147.0 0.653 0.0
6zdx 2 A0A0G2JQ46 80.15 0.0 X-RAY
 2020-07-22 ASN B:148 B:117 86.0 0.537 -119.5 162.5 86.0 0.537 0.0
6aee 4 A0A0G2JQ44 80.61 0.0 X-RAY
 2019-07-31 ASN G:116 G:117 121.0 0.756 -127.0 142.9 121.0 0.756 0.0
ASN H:116 H:117 127.0 0.794 -91.1 159.1 NA NA NA
6bcs 1 A0A0G2JNQ7 99.49 3e-141 X-RAY
 2018-09-05 ARG A:117 A:117 60.0 NA -98.5 156.2 60.0 NA NA HOH
 5.793
 O
 O
2gw5 1 Q8N423 99.49 5e-141 X-RAY
 2006-06-20 ARG A:116 A:117 161.0 0.716 -129.8 156.5 161.0 0.716 0.0 HOH
 2.851
 O
 O
2dyp 4 Q8N423 98.98 3e-139 X-RAY
 2006-11-07 ARG D:116 D:116 139.0 0.618 E -158.6 154.4 139.0 0.618 0.0
1ugn 1 Q8NHL6 81.31 7e-105 X-RAY
 2004-08-10 ASN A:117 A:117 92.0 0.575 -111.5 144.6 92.0 0.575 0.0 HOH
 2.693
 OD1
 O
3d2u 3 Q8NHL6 80.81 3e-104 X-RAY
 2008-07-08 ASN C:117 D:117 95.0 0.594 -101.0 158.1 95.0 0.594 0.0
ASN F:117 H:117 104.0 0.65 -114.1 135.4 NA NA NA
6k60 4 A0A0G2JQ44 81.12 6e-104 X-RAY
 2019-11-27 ASN D:118 NA:NA DO NA DO DO DO NA NA NA
ASN H:118 NA:NA DO NA DO DO DO NA NA NA
1g0x 1 Q8NHL6 81.12 1e-103 X-RAY
 2001-01-17 ASN A:116 A:117 103.0 0.644 -116.6 150.5 103.0 0.644 0.0 HOH
 3.520
 O
 O
1p7q 4 Q8NHL6 81.12 1e-103 X-RAY
 2003-10-14 ASN D:116 D:117 113.0 0.706 -76.9 149.5 113.0 0.706 0.0
1ufu 1 Q8NHL6 81.12 1e-103 X-RAY
 2004-08-10 ASN A:116 A:117 123.0 0.769 -127.4 167.4 123.0 0.769 0.0
4no0 4 Q8NHL6 81.54 2e-103 X-RAY
 2014-11-19 ASN D:114 D:117 101.0 0.631 -111.3 151.5 101.0 0.631 0.0 HOH
 4.549
 O
 O
6ewa 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 ASN D:114 D:117 112.0 0.7 -107.0 158.3 112.0 0.7 0.0 HOH
 7.679
 OD1
 O
ASN H:114 H:117 97.0 0.606 -119.6 157.2 NA NA NA
6ewc 4 A0A0G2JQ44 81.54 2e-103 X-RAY
 2018-11-07 ASN D:114 D:117 100.0 0.625 -117.6 154.1 100.0 0.625 0.0
ASN H:114 H:117 97.0 0.606 -121.2 151.1 NA NA NA
6ewo 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 ASN D:114 D:117 100.0 0.625 -109.9 162.0 100.0 0.625 0.0 HOH
 3.751
 CB
 O
ASN H:114 H:117 95.0 0.594 -116.9 159.2 NA NA NA
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 ASN A:117 A:117 90.0 0.562 -127.3 150.6 70.0 0.438 0.124 B:Q8NHL6:0.125
 HOH
 3.401
 ND2
 O
ASN B:117 B:117 98.0 0.613 -116.5 143.4 83.0 0.519 0.094 A:Q8NHL6:0.094
 HOH
 3.479
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n423-f1 1 Q8N423 100.0 0.0 ARG A:139 A:139 145.0 0.644 -116.2 146.6
af-o75019-f1 1 O75019 84.62 0.0 ASN A:140 A:140 116.0 0.725 -108.8 148.1
af-q8n6c8-f1 1 Q8N6C8 81.12 0.0 ASN A:140 A:140 102.0 0.637 -106.7 151.9