Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54783820 . A C CCDS12886.1:NM_005874.3:c.181Tat>Gat_NP_005865.2:p.61Y>D Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aed 1 Q8N423 99.24 0.0 X-RAY
 2019-07-31 TYR A:38 A:38 60.0 0.261 E -107.0 160.9 60.0 0.261 0.0
6zdx 2 A0A0G2JQ46 80.15 0.0 X-RAY
 2020-07-22 TYR B:69 B:38 77.0 0.335 E -152.6 138.0 77.0 0.335 0.0
6aee 4 A0A0G2JQ44 80.61 0.0 X-RAY
 2019-07-31 TYR G:37 G:38 80.0 0.348 E -157.2 157.0 17.0 0.074 0.274 A:P17693:0.274
TYR H:37 H:38 77.0 0.335 E -137.0 147.0 NA NA NA
6bcs 1 A0A0G2JNQ7 99.49 3e-141 X-RAY
 2018-09-05 TYR A:39 A:38 36.0 0.157 E -133.4 153.8 36.0 0.157 0.0 BEN
HOH
 3.990
5.421
 O
N
 C4
O
2gw5 1 Q8N423 99.49 5e-141 X-RAY
 2006-06-20 TYR A:38 A:38 49.0 0.213 E -126.7 159.4 49.0 0.213 0.0 IPA
HOH
 4.191
5.551
 O
N
 C3
O
2dyp 4 Q8N423 98.98 3e-139 X-RAY
 2006-11-07 TYR D:38 D:38 94.0 0.409 E -111.0 158.7 47.0 0.204 0.205 A:P17693:0.204
 HOH
 4.821
 OH
 O
1ugn 1 Q8NHL6 81.31 7e-105 X-RAY
 2004-08-10 TYR A:38 A:38 74.0 0.322 E -154.7 158.3 74.0 0.322 0.0 HOH
 2.950
 OH
 O
3d2u 3 Q8NHL6 80.81 3e-104 X-RAY
 2008-07-08 TYR C:38 D:38 80.0 0.348 E -156.0 149.7 16.0 0.07 0.278 A:Q4A1U8:0.278
 HOH
 2.941
 OH
 O
TYR F:38 H:38 81.0 0.352 E -153.4 153.9 NA NA NA
6k60 4 A0A0G2JQ44 81.12 6e-104 X-RAY
 2019-11-27 TYR D:39 D:38 69.0 0.3 E -151.3 147.9 67.0 0.291 0.009 A:P17693:0.009
TYR H:39 H:38 116.0 0.504 E -128.6 168.2 NA NA NA
1g0x 1 Q8NHL6 81.12 1e-103 X-RAY
 2001-01-17 TYR A:37 A:38 76.0 0.33 E -153.8 157.3 76.0 0.33 0.0 HOH
 3.590
 CA
 O
1p7q 4 Q8NHL6 81.12 1e-103 X-RAY
 2003-10-14 TYR D:37 D:38 80.0 0.348 E -149.6 145.5 30.0 0.13 0.218 A:P01892:0.217
1ufu 1 Q8NHL6 81.12 1e-103 X-RAY
 2004-08-10 TYR A:37 A:38 74.0 0.322 E -163.2 146.1 74.0 0.322 0.0
4no0 4 Q8NHL6 81.54 2e-103 X-RAY
 2014-11-19 TYR D:35 D:38 84.0 0.365 E -140.5 160.9 26.0 0.113 0.252 A:P01892:0.252
 EDO
HOH
 9.396
3.549
 CD1
CA
 O2
O
6ewa 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 TYR D:35 D:38 81.0 0.352 E -147.3 166.5 29.0 0.126 0.226 A:P01892:0.226
TYR H:35 H:38 76.0 0.33 E -150.4 155.6 NA NA NA
6ewc 4 A0A0G2JQ44 81.54 2e-103 X-RAY
 2018-11-07 TYR D:35 D:38 83.0 0.361 E -179.6 151.4 18.0 0.078 0.283 A:P01892:0.283
TYR H:35 H:38 84.0 0.365 E -155.6 150.8 NA NA NA
6ewo 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 TYR D:35 D:38 87.0 0.378 E -140.3 163.9 18.0 0.078 0.3 A:P01892:0.3
 HOH
 3.814
 CB
 O
TYR H:35 H:38 82.0 0.357 E -146.4 173.1 NA NA NA
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 TYR A:38 A:38 83.0 0.361 E -153.1 148.4 83.0 0.361 0.0 HOH
 3.283
 CA
 O
TYR B:38 B:38 79.0 0.343 E -152.9 153.7 79.0 0.343 0.0 HOH
 3.854
 CB
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n423-f1 1 Q8N423 100.0 0.0 TYR A:61 A:61 95.0 0.413 E -122.2 144.5
af-o75019-f1 1 O75019 84.62 0.0 TYR A:61 A:61 84.0 0.365 E -141.1 155.5
af-q8n6c8-f1 1 Q8N6C8 81.12 0.0 TYR A:61 A:61 90.0 0.391 E -139.2 153.7