Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 54783825 | . | C | A | CCDS12886.1:NM_005874.3:c.176cGt>cTt_NP_005865.2:p.59R>L | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6aed | 1 | Q8N423 | 99.24 | 0.0 |
X-RAY |
2019-07-31 | ARG | A:36 | A:36 | 63.0 | 0.28 | E | -93.0 | 141.1 | 63.0 | 0.28 | 0.0 | ||||||
6zdx | 2 | A0A0G2JQ46 | 80.15 | 0.0 |
X-RAY |
2020-07-22 | ARG | B:67 | B:36 | 135.0 | 0.6 | E | -153.5 | 135.1 | 135.0 | 0.6 | 0.0 | ||||||
6aee | 4 | A0A0G2JQ44 | 80.61 | 0.0 |
X-RAY |
2019-07-31 | ARG | G:35 | G:36 | 147.0 | 0.653 | E | -143.0 | 115.0 | 140.0 | 0.622 | 0.031 |
A:P17693:0.031 |
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ARG | H:35 | H:36 | 151.0 | 0.671 | E | -152.9 | 132.9 | NA | NA | NA | |||||||||||||
6bcs | 1 | A0A0G2JNQ7 | 99.49 | 3e-141 |
X-RAY |
2018-09-05 | ARG | A:37 | A:36 | 77.0 | 0.342 | E | -134.1 | 140.0 | 77.0 | 0.342 | 0.0 |
BEN HOH |
9.026 3.488 |
O CA |
C4 O |
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2gw5 | 1 | Q8N423 | 99.49 | 5e-141 |
X-RAY |
2006-06-20 | ARG | A:36 | A:36 | 77.0 | 0.342 | E | -130.0 | 129.9 | 77.0 | 0.342 | 0.0 |
IPA HOH |
8.139 3.599 |
O CA |
C1 O |
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2dyp | 4 | Q8N423 | 98.98 | 3e-139 |
X-RAY |
2006-11-07 | ARG | D:36 | D:36 | 103.0 | 0.458 | E | -125.8 | 124.4 | 45.0 | 0.2 | 0.258 |
A:P17693:0.258 |
HOH |
3.156 |
NH2 |
O |
|
1ugn | 1 | Q8NHL6 | 81.31 | 7e-105 |
X-RAY |
2004-08-10 | ARG | A:36 | A:36 | 116.0 | 0.516 | E | -136.2 | 129.5 | 116.0 | 0.516 | 0.0 |
HOH |
3.502 |
CA |
O |
||
3d2u | 3 | Q8NHL6 | 80.81 | 3e-104 |
X-RAY |
2008-07-08 | ARG | C:36 | D:36 | 100.0 | 0.444 | E | -135.0 | 135.0 | 67.0 | 0.298 | 0.146 |
A:Q4A1U8:0.147 |
HOH |
3.652 |
CA |
O |
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ARG | F:36 | H:36 | 96.0 | 0.427 | E | -137.7 | 141.6 | NA | NA | NA | |||||||||||||
6k60 | 4 | A0A0G2JQ44 | 81.12 | 6e-104 |
X-RAY |
2019-11-27 | ARG | D:37 | D:36 | 142.0 | 0.631 | E | -136.9 | 133.1 | 142.0 | 0.631 | 0.0 | ||||||
ARG | H:37 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
1g0x | 1 | Q8NHL6 | 81.12 | 1e-103 |
X-RAY |
2001-01-17 | ARG | A:35 | A:36 | 115.0 | 0.511 | E | -132.7 | 110.5 | 115.0 | 0.511 | 0.0 |
HOH |
2.752 |
CD |
O |
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1p7q | 4 | Q8NHL6 | 81.12 | 1e-103 |
X-RAY |
2003-10-14 | ARG | D:35 | D:36 | 164.0 | 0.729 | E | -112.2 | 147.8 | 144.0 | 0.64 | 0.089 |
A:P01892:0.089 |
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1ufu | 1 | Q8NHL6 | 81.12 | 1e-103 |
X-RAY |
2004-08-10 | ARG | A:35 | A:36 | 116.0 | 0.516 | E | -130.6 | 127.8 | 116.0 | 0.516 | 0.0 | ||||||
4no0 | 4 | Q8NHL6 | 81.54 | 2e-103 |
X-RAY |
2014-11-19 | ARG | D:33 | D:36 | 105.0 | 0.467 | E | -121.8 | 113.6 | 101.0 | 0.449 | 0.018 |
A:P01892:0.018 |
HOH |
6.766 |
C |
O |
|
6ewa | 4 | D9IDM8 | 81.54 | 2e-103 |
X-RAY |
2018-11-07 | ARG | D:33 | D:36 | 190.0 | 0.844 | -155.4 | 72.9 | 190.0 | 0.844 | 0.0 | |||||||
ARG | H:33 | H:36 | 141.0 | 0.627 | E | -145.4 | 99.9 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 81.54 | 2e-103 |
X-RAY |
2018-11-07 | ARG | D:33 | D:36 | 162.0 | 0.72 | -145.9 | -93.2 | 158.0 | 0.702 | 0.018 |
A:P01892:0.018 |
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ARG | H:33 | H:36 | 149.0 | 0.662 | E | -133.9 | 117.3 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 81.54 | 2e-103 |
X-RAY |
2018-11-07 | ARG | D:33 | D:36 | 86.0 | 0.382 | E | -144.8 | 110.9 | 86.0 | 0.382 | 0.0 |
HOH |
9.072 |
O |
O |
||
ARG | H:33 | H:36 | 164.0 | 0.729 | -139.5 | 108.0 | NA | NA | NA | ||||||||||||||
1vdg | 1 | Q8NHL6 | 80.1 | 3e-102 |
X-RAY |
2005-08-02 | ARG | A:36 | A:36 | 118.0 | 0.524 | E | -139.1 | 104.6 | 118.0 | 0.524 | 0.0 |
HOH |
8.127 |
C |
O |
||
ARG | B:36 | B:36 | 146.0 | 0.649 | E | -142.5 | 112.8 | 146.0 | 0.649 | 0.0 |
HOH |
3.852 |
NH1 |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8n423-f1 | 1 | Q8N423 | 100.0 | 0.0 | ARG | A:59 | A:59 | 103.0 | 0.458 | E | -130.8 | 139.7 | |
af-o75019-f1 | 1 | O75019 | 84.62 | 0.0 | ARG | A:59 | A:59 | 103.0 | 0.458 | E | -131.6 | 135.3 | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 81.12 | 0.0 | HIS | A:59 | A:59 | 89.0 | 0.456 | E | -126.8 | 122.0 |