Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54783873 . C A CCDS12886.1:NM_005874.3:c.128aGt>aTt_NP_005865.2:p.43S>I Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aed 1 Q8N423 99.24 0.0 X-RAY
 2019-07-31 SER A:20 A:20 46.0 0.4 S -67.0 151.1 46.0 0.4 0.0
6zdx 2 A0A0G2JQ46 80.15 0.0 X-RAY
 2020-07-22 SER B:51 B:20 39.0 0.339 -60.2 146.6 39.0 0.339 0.0
6aee 4 A0A0G2JQ44 80.61 0.0 X-RAY
 2019-07-31 SER G:19 G:20 45.0 0.391 -72.9 144.9 45.0 0.391 0.0
SER H:19 H:20 45.0 0.391 -69.0 153.0 NA NA NA
6bcs 1 A0A0G2JNQ7 99.49 3e-141 X-RAY
 2018-09-05 SER A:21 A:20 43.0 0.374 -93.1 158.2 43.0 0.374 0.0 CL
HOH
 8.846
2.865
 N
OG
 CL
O
2gw5 1 Q8N423 99.49 5e-141 X-RAY
 2006-06-20 SER A:20 A:20 33.0 0.287 -85.6 -171.7 33.0 0.287 0.0 HOH
 3.775
 CA
 O
2dyp 4 Q8N423 98.98 3e-139 X-RAY
 2006-11-07 SER D:20 D:20 42.0 0.365 -64.9 160.5 42.0 0.365 0.0 HOH
 5.625
 N
 O
1ugn 1 Q8NHL6 81.31 7e-105 X-RAY
 2004-08-10 SER A:20 A:20 42.0 0.365 -85.1 156.7 42.0 0.365 0.0 HOH
 2.938
 OG
 O
3d2u 3 Q8NHL6 80.81 3e-104 X-RAY
 2008-07-08 SER C:20 D:20 37.0 0.322 -73.6 162.2 37.0 0.322 0.0 HOH
 4.138
 C
 O
SER F:20 H:20 36.0 0.313 -90.6 161.4 NA NA NA
6k60 4 A0A0G2JQ44 81.12 6e-104 X-RAY
 2019-11-27 SER D:21 D:20 39.0 0.339 -108.6 153.1 39.0 0.339 0.0
SER H:21 H:20 29.0 0.252 -81.7 157.2 NA NA NA
1g0x 1 Q8NHL6 81.12 1e-103 X-RAY
 2001-01-17 SER A:19 A:20 40.0 0.348 -90.6 159.0 40.0 0.348 0.0 HOH
 2.707
 OG
 O
1p7q 4 Q8NHL6 81.12 1e-103 X-RAY
 2003-10-14 SER D:19 D:20 45.0 0.391 S -75.3 -173.4 45.0 0.391 0.0
1ufu 1 Q8NHL6 81.12 1e-103 X-RAY
 2004-08-10 SER A:19 A:20 37.0 0.322 -92.9 161.6 37.0 0.322 0.0
4no0 4 Q8NHL6 81.54 2e-103 X-RAY
 2014-11-19 SER D:17 D:20 41.0 0.357 -107.9 159.5 41.0 0.357 0.0 HOH
 6.667
 N
 O
6ewa 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 SER D:17 D:20 39.0 0.339 S -95.9 154.0 39.0 0.339 0.0
SER H:17 H:20 38.0 0.33 -80.0 155.8 NA NA NA
6ewc 4 A0A0G2JQ44 81.54 2e-103 X-RAY
 2018-11-07 SER D:17 D:20 42.0 0.365 -68.5 147.9 42.0 0.365 0.0
SER H:17 H:20 43.0 0.374 -68.6 148.4 NA NA NA
6ewo 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 SER D:17 D:20 40.0 0.348 -103.5 156.5 40.0 0.348 0.0 HOH
 6.533
 O
 O
SER H:17 H:20 38.0 0.33 -97.6 157.9 NA NA NA
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 SER A:20 A:20 42.0 0.365 -79.0 162.2 42.0 0.365 0.0 HOH
 9.113
 CB
 O
SER B:20 B:20 39.0 0.339 -80.4 158.2 39.0 0.339 0.0 HOH
 3.288
 CB
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n423-f1 1 Q8N423 100.0 0.0 SER A:43 A:43 39.0 0.339 -76.6 152.4
af-o75019-f1 1 O75019 84.62 0.0 SER A:43 A:43 40.0 0.348 -77.5 152.8
af-q8n6c8-f1 1 Q8N6C8 81.12 0.0 SER A:43 A:43 37.0 0.322 -81.4 153.5