Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 54783882 | . | G | A | CCDS12886.1:NM_005874.3:c.119aCc>aTc_NP_005865.2:p.40T>I | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6aed | 1 | Q8N423 | 99.24 | 0.0 |
X-RAY |
2019-07-31 | THR | A:17 | A:17 | 64.0 | 0.457 | E | -65.1 | 150.9 | 64.0 | 0.457 | 0.0 | ||||||
6zdx | 2 | A0A0G2JQ46 | 80.15 | 0.0 |
X-RAY |
2020-07-22 | THR | B:48 | B:17 | 72.0 | 0.514 | E | -78.4 | 153.5 | 72.0 | 0.514 | 0.0 | ||||||
6aee | 4 | A0A0G2JQ44 | 80.61 | 0.0 |
X-RAY |
2019-07-31 | THR | G:16 | G:17 | 71.0 | 0.507 | E | -69.0 | 149.0 | 71.0 | 0.507 | 0.0 | ||||||
THR | H:16 | H:17 | 62.0 | 0.443 | E | -75.0 | 159.0 | NA | NA | NA | |||||||||||||
6bcs | 1 | A0A0G2JNQ7 | 99.49 | 3e-141 |
X-RAY |
2018-09-05 | THR | A:18 | A:17 | 75.0 | 0.536 | E | -75.3 | 144.5 | 75.0 | 0.536 | 0.0 |
BEN CL DMS HOH |
9.845 8.045 9.933 2.840 |
N C C N |
C6 CL C2 O |
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2gw5 | 1 | Q8N423 | 99.49 | 5e-141 |
X-RAY |
2006-06-20 | THR | A:17 | A:17 | 88.0 | 0.629 | E | -71.2 | 144.4 | 88.0 | 0.629 | 0.0 |
HOH |
3.246 |
N |
O |
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2dyp | 4 | Q8N423 | 98.98 | 3e-139 |
X-RAY |
2006-11-07 | THR | D:17 | D:17 | 75.0 | 0.536 | E | -79.7 | 140.7 | 75.0 | 0.536 | 0.0 |
HOH |
6.569 |
O |
O |
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1ugn | 1 | Q8NHL6 | 81.31 | 7e-105 |
X-RAY |
2004-08-10 | THR | A:17 | A:17 | 75.0 | 0.536 | E | -76.0 | 139.3 | 75.0 | 0.536 | 0.0 |
HOH |
3.110 |
N |
O |
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3d2u | 3 | Q8NHL6 | 80.81 | 3e-104 |
X-RAY |
2008-07-08 | THR | C:17 | D:17 | 71.0 | 0.507 | E | -70.3 | 136.5 | 71.0 | 0.507 | 0.0 |
HOH |
3.026 |
OG1 |
O |
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THR | F:17 | H:17 | 73.0 | 0.521 | E | -74.6 | 133.9 | NA | NA | NA | |||||||||||||
6k60 | 4 | A0A0G2JQ44 | 81.12 | 6e-104 |
X-RAY |
2019-11-27 | THR | D:18 | D:17 | 64.0 | 0.457 | E | -89.9 | 155.3 | 63.0 | 0.45 | 0.007 |
B:P61769:0.007 |
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THR | H:18 | H:17 | 79.0 | 0.564 | E | -81.7 | 160.1 | NA | NA | NA | |||||||||||||
1g0x | 1 | Q8NHL6 | 81.12 | 1e-103 |
X-RAY |
2001-01-17 | THR | A:16 | A:17 | 59.0 | 0.421 | E | -71.3 | 137.3 | 59.0 | 0.421 | 0.0 |
HOH |
2.899 |
OG1 |
O |
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1p7q | 4 | Q8NHL6 | 81.12 | 1e-103 |
X-RAY |
2003-10-14 | THR | D:16 | D:17 | 63.0 | 0.45 | E | -79.2 | 126.3 | 63.0 | 0.45 | 0.0 | ||||||
1ufu | 1 | Q8NHL6 | 81.12 | 1e-103 |
X-RAY |
2004-08-10 | THR | A:16 | A:17 | 69.0 | 0.493 | E | -77.7 | 141.5 | 69.0 | 0.493 | 0.0 | ||||||
4no0 | 4 | Q8NHL6 | 81.54 | 2e-103 |
X-RAY |
2014-11-19 | THR | D:14 | D:17 | 74.0 | 0.529 | E | -72.6 | 149.7 | 74.0 | 0.529 | 0.0 |
HOH |
3.684 |
CG2 |
O |
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6ewa | 4 | D9IDM8 | 81.54 | 2e-103 |
X-RAY |
2018-11-07 | THR | D:14 | D:17 | 80.0 | 0.571 | E | -77.0 | 145.3 | 80.0 | 0.571 | 0.0 | ||||||
THR | H:14 | H:17 | 75.0 | 0.536 | E | -75.7 | 136.3 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 81.54 | 2e-103 |
X-RAY |
2018-11-07 | THR | D:14 | D:17 | 79.0 | 0.564 | E | -67.8 | 142.5 | 79.0 | 0.564 | 0.0 | ||||||
THR | H:14 | H:17 | 78.0 | 0.557 | E | -68.3 | 143.0 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 81.54 | 2e-103 |
X-RAY |
2018-11-07 | THR | D:14 | D:17 | 68.0 | 0.486 | E | -72.0 | 147.0 | 68.0 | 0.486 | 0.0 |
HOH |
5.862 |
CB |
O |
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THR | H:14 | H:17 | 79.0 | 0.564 | E | -70.6 | 136.2 | NA | NA | NA | |||||||||||||
1vdg | 1 | Q8NHL6 | 80.1 | 3e-102 |
X-RAY |
2005-08-02 | THR | A:17 | A:17 | 78.0 | 0.557 | E | -61.1 | 137.3 | 78.0 | 0.557 | 0.0 |
HOH |
6.635 |
N |
O |
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THR | B:17 | B:17 | 76.0 | 0.543 | E | -63.0 | 143.5 | 76.0 | 0.543 | 0.0 |
HOH |
3.430 |
CG2 |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8n423-f1 | 1 | Q8N423 | 100.0 | 0.0 | THR | A:40 | A:40 | 71.0 | 0.507 | E | -73.5 | 143.9 | |
af-o75019-f1 | 1 | O75019 | 84.62 | 0.0 | THR | A:40 | A:40 | 73.0 | 0.521 | E | -72.6 | 141.3 | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 81.12 | 0.0 | THR | A:40 | A:40 | 69.0 | 0.493 | E | -72.0 | 137.5 |