Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 54803030 | . | C | A | CCDS12887.1:NM_006865.3:c.647gGg>gTg_NP_006856.3:p.216G>V | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3 (LILRA3), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6zdx | 2 | A0A0G2JQ46 | 85.71 | 0.0 |
X-RAY |
2020-07-22 | GLU | B:224 | B:193 | 36.0 | 0.189 | E | -111.9 | 137.7 | 36.0 | 0.189 | 0.0 | ||||||
6aee | 4 | A0A0G2JQ44 | 86.22 | 0.0 |
X-RAY |
2019-07-31 | GLU | G:192 | G:193 | 85.0 | 0.447 | E | -109.0 | 131.1 | 85.0 | 0.447 | 0.0 | ||||||
GLU | H:192 | H:193 | 75.0 | 0.395 | E | -137.0 | 119.1 | NA | NA | NA | |||||||||||||
6aed | 1 | Q8N423 | 81.36 | 0.0 |
X-RAY |
2019-07-31 | GLU | A:192 | A:193 | 24.0 | 0.126 | E | -103.0 | 120.9 | 24.0 | 0.126 | 0.0 | ||||||
3d2u | 3 | Q8NHL6 | 88.38 | 3e-121 |
X-RAY |
2008-07-08 | GLU | C:193 | D:193 | 109.0 | 0.574 | E | -117.0 | 129.3 | 109.0 | 0.574 | 0.0 |
HOH |
6.814 |
O |
O |
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GLU | F:193 | H:193 | 105.0 | 0.553 | E | -112.8 | 121.6 | NA | NA | NA | |||||||||||||
6k60 | 4 | A0A0G2JQ44 | 88.78 | 5e-121 |
X-RAY |
2019-11-27 | GLU | D:194 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
GLU | H:194 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
1g0x | 1 | Q8NHL6 | 88.78 | 9e-121 |
X-RAY |
2001-01-17 | GLU | A:192 | A:193 | 112.0 | 0.589 | E | -114.8 | 115.0 | 112.0 | 0.589 | 0.0 |
HOH |
2.371 |
OE2 |
O |
||
1p7q | 4 | Q8NHL6 | 88.78 | 9e-121 |
X-RAY |
2003-10-14 | GLU | D:192 | D:193 | 110.0 | 0.579 | E | -87.3 | 139.3 | 110.0 | 0.579 | 0.0 | ||||||
1ufu | 1 | Q8NHL6 | 88.78 | 9e-121 |
X-RAY |
2004-08-10 | GLU | A:192 | A:193 | 117.0 | 0.616 | E | -108.7 | 117.4 | 117.0 | 0.616 | 0.0 | ||||||
1ugn | 1 | Q8NHL6 | 87.88 | 2e-120 |
X-RAY |
2004-08-10 | GLU | A:193 | A:193 | 93.0 | 0.489 | E | -106.9 | 125.5 | 93.0 | 0.489 | 0.0 |
HOH |
2.633 |
O |
O |
||
4no0 | 4 | Q8NHL6 | 88.72 | 2e-120 |
X-RAY |
2014-11-19 | GLU | D:190 | D:193 | 115.0 | 0.605 | E | -106.1 | 122.2 | 115.0 | 0.605 | 0.0 |
HOH |
2.534 |
OE2 |
O |
||
6ewa | 4 | D9IDM8 | 88.72 | 2e-120 |
X-RAY |
2018-11-07 | GLU | D:190 | D:193 | 110.0 | 0.579 | E | -105.6 | 126.8 | 110.0 | 0.579 | 0.0 |
HOH |
5.078 |
N |
O |
||
GLU | H:190 | H:193 | 109.0 | 0.574 | E | -107.4 | 131.2 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 88.72 | 2e-120 |
X-RAY |
2018-11-07 | GLU | D:190 | D:193 | 113.0 | 0.595 | E | -99.9 | 130.0 | 113.0 | 0.595 | 0.0 | ||||||
GLU | H:190 | H:193 | 114.0 | 0.6 | E | -96.3 | 130.9 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 88.72 | 2e-120 |
X-RAY |
2018-11-07 | GLU | D:190 | D:193 | 107.0 | 0.563 | E | -105.9 | 134.3 | 107.0 | 0.563 | 0.0 |
HOH |
2.944 |
OE1 |
O |
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GLU | H:190 | H:193 | 113.0 | 0.595 | E | -111.4 | 131.9 | NA | NA | NA | |||||||||||||
1vdg | 1 | Q8NHL6 | 88.27 | 3e-120 |
X-RAY |
2005-08-02 | GLU | A:193 | A:193 | 100.0 | 0.526 | E | -102.9 | 122.9 | 100.0 | 0.526 | 0.0 |
HOH |
8.630 |
N |
O |
||
GLU | B:193 | B:193 | 100.0 | 0.526 | E | -81.9 | 123.5 | 100.0 | 0.526 | 0.0 | |||||||||||||
5knm | 3 | Q8NHL6 | 87.88 | 3e-120 |
X-RAY |
2017-06-14 | GLU | C:262 | D:193 | 15.0 | NA | S | -76.0 | -171.9 | 15.0 | NA | NA | ||||||
2otp | 1 | Q8N149 | 83.84 | 4e-112 |
X-RAY |
2008-02-19 | GLU | A:191 | A:191 | 114.0 | 0.6 | E | -104.6 | 116.2 | 110.0 | 0.579 | 0.021 |
B:Q8N149:0.021 |
HOH |
4.253 |
OE1 |
O |
|
GLU | B:191 | B:191 | 110.0 | 0.579 | -112.9 | 137.8 | 102.0 | 0.537 | 0.042 |
A:Q8N149:0.042 |
HOH |
4.001 |
OE2 |
O |
|||||||||
2gw5 | 1 | Q8N423 | 80.3 | 5e-106 |
X-RAY |
2006-06-20 | GLU | A:192 | A:193 | 87.0 | 0.458 | E | -113.8 | 143.3 | 87.0 | 0.458 | 0.0 |
HOH |
2.352 |
OE1 |
O |
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6bcs | 1 | A0A0G2JNQ7 | 80.3 | 6e-106 |
X-RAY |
2018-09-05 | GLU | A:193 | A:193 | 98.0 | 0.516 | E | -103.5 | 125.7 | 98.0 | 0.516 | 0.0 |
HOH |
2.816 |
N |
O |
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2dyp | 4 | Q8N423 | 80.2 | 2e-105 |
X-RAY |
2006-11-07 | GLU | D:192 | D:192 | 85.0 | 0.447 | E | -104.5 | 145.1 | 85.0 | 0.447 | 0.0 |
HOH |
3.395 |
OE1 |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 100.0 | 0.0 | GLY | A:216 | A:216 | 10.0 | 0.133 | E | -88.3 | 144.4 | |
af-o75019-f1 | 1 | O75019 | 85.39 | 0.0 | GLU | A:216 | A:216 | 64.0 | 0.337 | E | -94.3 | 130.8 | |
af-q8nhl6-f1 | 1 | Q8NHL6 | 86.4 | 0.0 | GLU | A:216 | A:216 | 39.0 | 0.205 | E | -101.8 | 137.7 | |
af-q8n149-f1 | 1 | Q8N149 | 81.84 | 0.0 | GLU | A:214 | A:214 | 25.0 | 0.132 | E | -100.8 | 133.2 | |
af-q8n423-f1 | 1 | Q8N423 | 81.12 | 0.0 | GLU | A:215 | A:215 | 57.0 | 0.3 | E | -94.4 | 127.8 |