Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54803153 . C A CCDS12887.1:NM_006865.3:c.524cGt>cTt_NP_006856.3:p.175R>L Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3 (LILRA3), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6zdx 2 A0A0G2JQ46 85.71 0.0 X-RAY
 2020-07-22 ARG B:183 B:152 178.0 0.791 G -63.6 158.5 178.0 0.791 0.0
6aee 4 A0A0G2JQ44 86.22 0.0 X-RAY
 2019-07-31 ARG G:151 NA:NA DO NA DO DO DO NA NA NA
ARG H:151 NA:NA DO NA DO DO DO NA NA NA
6aed 1 Q8N423 81.36 0.0 X-RAY
 2019-07-31 ARG A:151 A:152 110.0 NA S -71.1 -55.1 110.0 NA NA
3d2u 3 Q8NHL6 88.38 3e-121 X-RAY
 2008-07-08 ARG C:152 NA:NA DO NA DO DO DO NA NA NA
ARG F:152 NA:NA DO NA DO DO DO NA NA NA
6k60 4 A0A0G2JQ44 88.78 5e-121 X-RAY
 2019-11-27 ARG D:153 NA:NA DO NA DO DO DO NA NA NA
ARG H:153 NA:NA DO NA DO DO DO NA NA NA
1g0x 1 Q8NHL6 88.78 9e-121 X-RAY
 2001-01-17 ARG A:151 A:152 102.0 0.453 E -137.9 135.5 102.0 0.453 0.0 HOH
 2.937
 NE
 O
1p7q 4 Q8NHL6 88.78 9e-121 X-RAY
 2003-10-14 ARG D:151 D:152 247.0 1.0 S -109.1 -42.8 247.0 1.0 0.0
1ufu 1 Q8NHL6 88.78 9e-121 X-RAY
 2004-08-10 ARG A:151 NA:NA DO NA DO DO DO NA NA NA
1ugn 1 Q8NHL6 87.88 2e-120 X-RAY
 2004-08-10 ARG A:152 NA:NA DO NA DO DO DO NA NA NA
4no0 4 Q8NHL6 88.72 2e-120 X-RAY
 2014-11-19 ARG D:149 D:152 246.0 1.0 S -83.0 -67.3 246.0 1.0 0.0 HOH
 4.311
 N
 O
6ewa 4 D9IDM8 88.72 2e-120 X-RAY
 2018-11-07 ARG D:149 D:152 259.0 1.0 T -27.7 -73.6 259.0 1.0 0.0
ARG H:149 H:152 255.0 1.0 T -71.7 133.1 NA NA NA
6ewc 4 A0A0G2JQ44 88.72 2e-120 X-RAY
 2018-11-07 ARG D:149 D:152 266.0 1.0 S -46.6 -48.9 266.0 1.0 0.0
ARG H:149 H:152 260.0 1.0 S -68.2 -33.2 NA NA NA
6ewo 4 D9IDM8 88.72 2e-120 X-RAY
 2018-11-07 ARG D:149 D:152 261.0 1.0 T -65.5 109.8 261.0 1.0 0.0 HOH
 9.091
 N
 O
ARG H:149 H:152 253.0 1.0 T -68.0 138.8 NA NA NA
1vdg 1 Q8NHL6 88.27 3e-120 X-RAY
 2005-08-02 ARG A:152 A:152 200.0 0.889 S -113.3 96.0 200.0 0.889 0.0 HOH
 5.012
 C
 O
ARG B:152 B:152 181.0 0.804 360.0 31.4 120.0 0.533 0.271 A:Q8NHL6:0.271
 HOH
 7.233
 NH2
 O
5knm 3 Q8NHL6 87.88 3e-120 X-RAY
 2017-06-14 ARG C:221 D:152 248.0 1.0 S -70.2 -54.9 248.0 1.0 0.0
2otp 1 Q8N149 83.84 4e-112 X-RAY
 2008-02-19 ARG A:150 A:150 240.0 1.0 S -57.5 135.2 240.0 1.0 0.0 HOH
 2.652
 O
 O
ARG B:150 B:150 218.0 0.969 T -80.5 166.6 218.0 0.969 0.0 HOH
 5.816
 N
 O
2gw5 1 Q8N423 80.3 5e-106 X-RAY
 2006-06-20 ARG A:151 A:152 109.0 NA S -83.2 -10.2 109.0 NA NA HOH
 2.693
 N
 O
6bcs 1 A0A0G2JNQ7 80.3 6e-106 X-RAY
 2018-09-05 ARG A:152 A:152 95.0 NA T -109.8 42.2 95.0 NA NA BEN
HOH
 8.773
3.228
 O
CB
 N2
O
2dyp 4 Q8N423 80.2 2e-105 X-RAY
 2006-11-07 ARG D:151 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n6c8-f1 1 Q8N6C8 100.0 0.0 ARG A:175 A:175 210.0 0.933 T -38.7 123.0
af-o75019-f1 1 O75019 85.39 0.0 HIS A:175 A:175 150.0 0.769 S -139.7 124.6
af-q8nhl6-f1 1 Q8NHL6 86.4 0.0 ARG A:175 A:175 191.0 0.849 T -48.3 119.3
af-q8n149-f1 1 Q8N149 81.84 0.0 ARG A:173 A:173 207.0 0.92 T -93.5 4.9
af-q8n423-f1 1 Q8N423 81.12 0.0 ARG A:174 A:174 228.0 1.0 S -15.2 115.2