Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54803198 . C A CCDS12887.1:NM_006865.3:c.479gGa>gTa_NP_006856.3:p.160G>V Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3 (LILRA3), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6zdx 2 A0A0G2JQ46 85.71 0.0 X-RAY
2020-07-22 GLY B:168 B:137 18.0 0.24 -141.3 162.2 18.0 0.24 0.0
6aee 4 A0A0G2JQ44 86.22 0.0 X-RAY
2019-07-31 GLY G:136 G:137 23.0 0.307 155.2 -130.5 23.0 0.307 0.0
GLY H:136 NA:NA DO NA DO DO DO NA NA NA
6aed 1 Q8N423 81.36 0.0 X-RAY
2019-07-31 GLY A:136 NA:NA DO NA DO DO DO NA NA NA
3d2u 3 Q8NHL6 88.38 3e-121 X-RAY
2008-07-08 GLY C:137 NA:NA DO NA DO DO DO NA NA NA
GLY F:137 H:137 29.0 0.387 103.6 -2.3 NA NA NA
6k60 4 A0A0G2JQ44 88.78 5e-121 X-RAY
2019-11-27 GLY D:138 NA:NA DO NA DO DO DO NA NA NA
GLY H:138 NA:NA DO NA DO DO DO NA NA NA
1g0x 1 Q8NHL6 88.78 9e-121 X-RAY
2001-01-17 GLY A:136 A:137 29.0 0.387 -61.9 160.0 29.0 0.387 0.0 HOH
4.304
C
O
1p7q 4 Q8NHL6 88.78 9e-121 X-RAY
2003-10-14 GLY D:136 D:137 15.0 0.2 -58.0 115.0 15.0 0.2 0.0
1ufu 1 Q8NHL6 88.78 9e-121 X-RAY
2004-08-10 GLY A:136 NA:NA DO NA DO DO DO NA NA NA
1ugn 1 Q8NHL6 87.88 2e-120 X-RAY
2004-08-10 GLY A:137 NA:NA DO NA DO DO DO NA NA NA
4no0 4 Q8NHL6 88.72 2e-120 X-RAY
2014-11-19 GLY D:134 D:137 61.0 0.813 98.2 360.0 61.0 0.813 0.0 HOH
9.151
CA
O
6ewa 4 D9IDM8 88.72 2e-120 X-RAY
2018-11-07 GLY D:134 D:137 102.0 1.0 79.8 360.0 102.0 1.0 0.0
GLY H:134 H:137 41.0 0.547 81.1 -21.1 NA NA NA
6ewc 4 A0A0G2JQ44 88.72 2e-120 X-RAY
2018-11-07 GLY D:134 D:137 81.0 1.0 111.8 360.0 81.0 1.0 0.0
GLY H:134 H:137 81.0 1.0 109.3 360.0 NA NA NA
6ewo 4 D9IDM8 88.72 2e-120 X-RAY
2018-11-07 GLY D:134 D:137 49.0 0.653 166.6 360.0 49.0 0.653 0.0 HOH
2.802
O
O
GLY H:134 H:137 45.0 0.6 90.6 2.3 NA NA NA
1vdg 1 Q8NHL6 88.27 3e-120 X-RAY
2005-08-02 GLY A:137 NA:NA DO NA DO DO DO NA NA NA
GLY B:137 NA:NA DO NA DO DO DO NA NA NA
5knm 3 Q8NHL6 87.88 3e-120 X-RAY
2017-06-14 GLY C:206 D:137 60.0 0.8 80.3 360.0 60.0 0.8 0.0
2otp 1 Q8N149 83.84 4e-112 X-RAY
2008-02-19 GLY A:135 A:135 55.0 0.733 -101.0 -147.0 14.0 0.187 0.546 B:Q8N149:0.547
HOH
4.046
CA
O
GLY B:135 B:135 21.0 0.28 -94.0 156.7 14.0 0.187 0.093 A:Q8N149:0.093
HOH
5.299
O
O
2gw5 1 Q8N423 80.3 5e-106 X-RAY
2006-06-20 GLY A:136 NA:NA DO NA DO DO DO NA NA NA
6bcs 1 A0A0G2JNQ7 80.3 6e-106 X-RAY
2018-09-05 GLY A:137 A:137 28.0 0.373 -139.4 176.0 28.0 0.373 0.0 BEN
9.906
N
N2
2dyp 4 Q8N423 80.2 2e-105 X-RAY
2006-11-07 GLY D:136 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n6c8-f1 1 Q8N6C8 100.0 0.0 GLY A:160 A:160 49.0 0.653 S 157.2 -154.0
af-o75019-f1 1 O75019 85.39 0.0 GLY A:160 A:160 53.0 0.707 S 160.0 -169.4
af-q8nhl6-f1 1 Q8NHL6 86.4 0.0 GLY A:160 A:160 28.0 0.373 -155.1 151.1
af-q8n149-f1 1 Q8N149 81.84 0.0 GLY A:158 A:158 86.0 1.0 S 80.6 -1.0
af-q8n423-f1 1 Q8N423 81.12 0.0 GLY A:159 A:159 51.0 0.68 S 164.9 -167.2