Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 54803202 | . | C | A | CCDS12887.1:NM_006865.3:c.475Gaa>Taa_NP_006856.3:p.159E>* | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3 (LILRA3), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6zdx | 2 | A0A0G2JQ46 | 85.71 | 0.0 |
X-RAY |
2020-07-22 | GLU | B:167 | B:136 | 53.0 | 0.279 | E | -118.3 | 147.1 | 53.0 | 0.279 | 0.0 | ||||||
6aee | 4 | A0A0G2JQ44 | 86.22 | 0.0 |
X-RAY |
2019-07-31 | GLU | G:135 | G:136 | 61.0 | 0.321 | E | -81.1 | -170.6 | 61.0 | 0.321 | 0.0 | ||||||
GLU | H:135 | H:136 | 143.0 | 0.753 | -89.2 | 360.0 | NA | NA | NA | ||||||||||||||
6aed | 1 | Q8N423 | 81.36 | 0.0 |
X-RAY |
2019-07-31 | GLU | A:135 | A:136 | 113.0 | 0.595 | -131.3 | 360.0 | 113.0 | 0.595 | 0.0 | |||||||
3d2u | 3 | Q8NHL6 | 88.38 | 3e-121 |
X-RAY |
2008-07-08 | GLU | C:136 | D:136 | 90.0 | 0.474 | -119.7 | 360.0 | 90.0 | 0.474 | 0.0 |
HOH |
7.297 |
N |
O |
|||
GLU | F:136 | H:136 | 78.0 | 0.411 | E | -126.0 | 167.9 | NA | NA | NA | |||||||||||||
6k60 | 4 | A0A0G2JQ44 | 88.78 | 5e-121 |
X-RAY |
2019-11-27 | GLU | D:137 | D:136 | 114.0 | 0.6 | -76.4 | 360.0 | 114.0 | 0.6 | 0.0 | |||||||
GLU | H:137 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
1g0x | 1 | Q8NHL6 | 88.78 | 9e-121 |
X-RAY |
2001-01-17 | GLU | A:135 | A:136 | 37.0 | 0.195 | -67.0 | 106.5 | 37.0 | 0.195 | 0.0 |
HOH |
2.709 |
OE2 |
O |
|||
1p7q | 4 | Q8NHL6 | 88.78 | 9e-121 |
X-RAY |
2003-10-14 | GLU | D:135 | D:136 | 59.0 | 0.311 | -68.6 | -35.8 | 59.0 | 0.311 | 0.0 | |||||||
1ufu | 1 | Q8NHL6 | 88.78 | 9e-121 |
X-RAY |
2004-08-10 | GLU | A:135 | A:136 | 114.0 | 0.6 | -26.6 | 360.0 | 114.0 | 0.6 | 0.0 | |||||||
1ugn | 1 | Q8NHL6 | 87.88 | 2e-120 |
X-RAY |
2004-08-10 | GLU | A:136 | A:136 | 103.0 | 0.542 | -82.5 | 360.0 | 103.0 | 0.542 | 0.0 |
HOH |
2.845 |
OE2 |
O |
|||
4no0 | 4 | Q8NHL6 | 88.72 | 2e-120 |
X-RAY |
2014-11-19 | GLU | D:133 | D:136 | 53.0 | 0.279 | E | -75.9 | 172.7 | 53.0 | 0.279 | 0.0 |
HOH |
6.222 |
OE1 |
O |
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6ewa | 4 | D9IDM8 | 88.72 | 2e-120 |
X-RAY |
2018-11-07 | GLU | D:133 | D:136 | 56.0 | 0.295 | E | -107.0 | 153.2 | 56.0 | 0.295 | 0.0 |
HOH |
7.490 |
OE2 |
O |
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GLU | H:133 | H:136 | 59.0 | 0.311 | E | -143.8 | 150.9 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 88.72 | 2e-120 |
X-RAY |
2018-11-07 | GLU | D:133 | D:136 | 68.0 | 0.358 | E | -115.1 | 169.6 | 68.0 | 0.358 | 0.0 | ||||||
GLU | H:133 | H:136 | 69.0 | 0.363 | E | -112.0 | 165.5 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 88.72 | 2e-120 |
X-RAY |
2018-11-07 | GLU | D:133 | D:136 | 105.0 | 0.553 | 53.2 | 125.6 | 105.0 | 0.553 | 0.0 |
HOH |
4.680 |
O |
O |
|||
GLU | H:133 | H:136 | 62.0 | 0.326 | E | -147.2 | 158.5 | NA | NA | NA | |||||||||||||
1vdg | 1 | Q8NHL6 | 88.27 | 3e-120 |
X-RAY |
2005-08-02 | GLU | A:136 | A:136 | 106.0 | 0.558 | -70.2 | 360.0 | 106.0 | 0.558 | 0.0 |
HOH |
3.417 |
OE1 |
O |
|||
GLU | B:136 | B:136 | 102.0 | 0.537 | -58.6 | 360.0 | 102.0 | 0.537 | 0.0 |
HOH |
2.944 |
OE2 |
O |
||||||||||
5knm | 3 | Q8NHL6 | 87.88 | 3e-120 |
X-RAY |
2017-06-14 | GLU | C:205 | D:136 | 31.0 | NA | -77.7 | -68.1 | 31.0 | NA | NA | |||||||
2otp | 1 | Q8N149 | 83.84 | 4e-112 |
X-RAY |
2008-02-19 | GLU | A:134 | A:134 | 132.0 | 0.695 | -120.2 | 125.9 | 68.0 | 0.358 | 0.337 |
B:Q8N149:0.337 |
HOH |
3.862 |
O |
O |
||
GLU | B:134 | B:134 | 135.0 | 0.711 | -88.1 | 155.2 | 35.0 | 0.184 | 0.527 |
A:Q8N149:0.526 |
HOH |
7.084 |
O |
O |
|||||||||
2gw5 | 1 | Q8N423 | 80.3 | 5e-106 |
X-RAY |
2006-06-20 | GLU | A:135 | A:136 | 115.0 | 0.605 | -108.9 | 360.0 | 115.0 | 0.605 | 0.0 |
HOH |
2.515 |
O |
O |
|||
6bcs | 1 | A0A0G2JNQ7 | 80.3 | 6e-106 |
X-RAY |
2018-09-05 | GLU | A:136 | A:136 | 58.0 | NA | E | -129.5 | 138.7 | 58.0 | NA | NA |
BEN |
7.366 |
CB |
N2 |
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2dyp | 4 | Q8N423 | 80.2 | 2e-105 |
X-RAY |
2006-11-07 | GLU | D:135 | D:135 | 95.0 | 0.5 | -129.1 | 360.0 | 95.0 | 0.5 | 0.0 |
HOH |
6.657 |
O |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 100.0 | 0.0 | GLU | A:159 | A:159 | 43.0 | 0.226 | E | -100.6 | 131.1 | |
af-o75019-f1 | 1 | O75019 | 85.39 | 0.0 | GLU | A:159 | A:159 | 45.0 | 0.237 | E | -99.3 | 133.5 | |
af-q8nhl6-f1 | 1 | Q8NHL6 | 86.4 | 0.0 | GLU | A:159 | A:159 | 38.0 | 0.2 | E | -97.4 | 139.2 | |
af-q8n149-f1 | 1 | Q8N149 | 81.84 | 0.0 | GLU | A:157 | A:157 | 60.0 | 0.316 | S | -84.4 | 141.9 | |
af-q8n423-f1 | 1 | Q8N423 | 81.12 | 0.0 | GLU | A:158 | A:158 | 43.0 | 0.226 | E | -99.8 | 140.1 |