Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54803504 . A C CCDS12887.1:NM_006865.3:c.320cTc>cGc_NP_006856.3:p.107L>R Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3 (LILRA3), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6zdx 2 A0A0G2JQ46 85.71 0.0 X-RAY
 2020-07-22 ARG B:115 B:84 117.0 0.52 178.2 163.2 117.0 0.52 0.0
6aee 4 A0A0G2JQ44 86.22 0.0 X-RAY
 2019-07-31 ARG G:83 G:84 157.0 0.698 -63.1 130.9 96.0 0.427 0.271 A:P17693:0.271
ARG H:83 H:84 146.0 0.649 -163.3 127.0 NA NA NA
6aed 1 Q8N423 81.36 0.0 X-RAY
 2019-07-31 TRP A:83 A:84 83.0 0.325 E -82.9 131.0 83.0 0.325 0.0
3d2u 3 Q8NHL6 88.38 3e-121 X-RAY
 2008-07-08 ARG C:84 D:84 127.0 0.564 B -154.9 114.4 80.0 0.356 0.208 A:Q4A1U8:0.209
 HOH
 3.143
 NH2
 O
ARG F:84 H:84 75.0 0.333 E -123.2 151.2 NA NA NA
6k60 4 A0A0G2JQ44 88.78 5e-121 X-RAY
 2019-11-27 ARG D:85 D:84 204.0 0.907 360.0 131.6 204.0 0.907 0.0
ARG H:85 NA:NA DO NA DO DO DO NA NA NA
1g0x 1 Q8NHL6 88.78 9e-121 X-RAY
 2001-01-17 ARG A:83 A:84 82.0 0.364 E -136.7 158.0 82.0 0.364 0.0 HOH
 3.003
 N
 O
1p7q 4 Q8NHL6 88.78 9e-121 X-RAY
 2003-10-14 ARG D:83 D:84 140.0 NA 360.0 152.8 140.0 NA NA
1ufu 1 Q8NHL6 88.78 9e-121 X-RAY
 2004-08-10 ARG A:83 A:84 83.0 0.369 E -134.2 170.8 83.0 0.369 0.0
1ugn 1 Q8NHL6 87.88 2e-120 X-RAY
 2004-08-10 ARG A:84 A:84 87.0 0.387 E -133.9 158.2 87.0 0.387 0.0 HOH
 2.858
 N
 O
4no0 4 Q8NHL6 88.72 2e-120 X-RAY
 2014-11-19 ARG D:81 D:84 213.0 0.947 173.2 32.0 213.0 0.947 0.0
6ewa 4 D9IDM8 88.72 2e-120 X-RAY
 2018-11-07 ARG D:81 NA:NA DO NA DO DO DO NA NA NA
ARG H:81 H:84 137.0 0.609 E -144.2 156.9 NA NA NA
6ewc 4 A0A0G2JQ44 88.72 2e-120 X-RAY
 2018-11-07 ARG D:81 D:84 86.0 0.382 -171.9 113.5 49.0 0.218 0.164 A:P01892:0.164
ARG H:81 H:84 83.0 0.369 B -171.3 113.6 NA NA NA
6ewo 4 D9IDM8 88.72 2e-120 X-RAY
 2018-11-07 ARG D:81 D:84 91.0 0.404 55.1 85.8 61.0 0.271 0.133 A:P01892:0.133
ARG H:81 NA:NA DO NA DO DO DO NA NA NA
1vdg 1 Q8NHL6 88.27 3e-120 X-RAY
 2005-08-02 ARG A:84 A:84 112.0 0.498 -135.3 173.0 112.0 0.498 0.0 HOH
 9.748
 O
 O
ARG B:84 B:84 122.0 0.542 -109.2 148.2 122.0 0.542 0.0 HOH
 4.246
 CG
 O
5knm 3 Q8NHL6 87.88 3e-120 X-RAY
 2017-06-14 ARG C:153 D:84 108.0 0.48 -154.6 153.1 54.0 0.24 0.24 A:B3KUD8:0.24
2gw5 1 Q8N423 80.3 5e-106 X-RAY
 2006-06-20 TRP A:83 A:84 82.0 0.322 E -90.0 135.6 82.0 0.322 0.0 HOH
 2.954
 O
 O
6bcs 1 A0A0G2JNQ7 80.3 6e-106 X-RAY
 2018-09-05 TRP A:84 A:84 68.0 0.267 E -92.8 141.6 68.0 0.267 0.0 HOH
 5.169
 O
 O
2dyp 4 Q8N423 80.2 2e-105 X-RAY
 2006-11-07 TRP D:83 D:83 77.0 0.302 E -88.6 139.3 77.0 0.302 0.0 HOH
 5.290
 CB
 O
3q2c 1 Q8N6C8 98.97 3e-63 X-RAY
 2011-07-13 LEU A:84 A:84 110.0 0.647 E -85.6 149.8 110.0 0.647 0.0 HOH
 2.360
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n6c8-f1 1 Q8N6C8 100.0 0.0 LEU A:107 A:107 117.0 0.688 E -101.4 145.2
af-o75019-f1 1 O75019 85.39 0.0 TRP A:107 A:107 80.0 0.314 E -109.3 144.9
af-q8nhl6-f1 1 Q8NHL6 86.4 0.0 ARG A:107 A:107 171.0 0.76 E -110.1 138.2
af-q8n423-f1 1 Q8N423 81.12 0.0 TRP A:106 A:106 87.0 0.341 E -83.0 143.5