Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54803540 . C A CCDS12887.1:NM_006865.3:c.284cGg>cTg_NP_006856.3:p.95R>L Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3 (LILRA3), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6zdx 2 A0A0G2JQ46 85.71 0.0 X-RAY
 2020-07-22 ARG B:103 B:72 80.0 0.356 E -94.3 125.9 80.0 0.356 0.0
6aee 4 A0A0G2JQ44 86.22 0.0 X-RAY
 2019-07-31 ARG G:71 G:72 81.0 0.36 E -97.0 121.1 81.0 0.36 0.0
ARG H:71 H:72 71.0 0.316 E -90.9 130.9 NA NA NA
6aed 1 Q8N423 81.36 0.0 X-RAY
 2019-07-31 ARG A:72 A:72 98.0 0.436 E -91.1 125.0 98.0 0.436 0.0
3d2u 3 Q8NHL6 88.38 3e-121 X-RAY
 2008-07-08 ARG C:72 D:72 83.0 0.369 E -97.4 113.8 83.0 0.369 0.0 HOH
 3.053
 N
 O
ARG F:72 H:72 76.0 0.338 E -104.9 116.2 NA NA NA
6k60 4 A0A0G2JQ44 88.78 5e-121 X-RAY
 2019-11-27 ARG D:73 D:72 93.0 0.413 E -106.9 127.2 93.0 0.413 0.0
ARG H:73 H:72 111.0 0.493 -96.9 136.4 NA NA NA
1g0x 1 Q8NHL6 88.78 9e-121 X-RAY
 2001-01-17 ARG A:71 A:72 83.0 0.369 E -103.4 115.5 83.0 0.369 0.0 HOH
 2.872
 N
 O
1p7q 4 Q8NHL6 88.78 9e-121 X-RAY
 2003-10-14 ARG D:71 D:72 86.0 0.382 E -83.9 144.4 86.0 0.382 0.0
1ufu 1 Q8NHL6 88.78 9e-121 X-RAY
 2004-08-10 ARG A:71 A:72 80.0 0.356 E -97.6 117.4 80.0 0.356 0.0
1ugn 1 Q8NHL6 87.88 2e-120 X-RAY
 2004-08-10 ARG A:72 A:72 72.0 0.32 E -100.8 122.1 72.0 0.32 0.0 HOH
 2.637
 NH2
 O
4no0 4 Q8NHL6 88.72 2e-120 X-RAY
 2014-11-19 ARG D:69 D:72 82.0 0.364 E -100.3 120.7 82.0 0.364 0.0 HOH
 4.863
 NH2
 O
6ewa 4 D9IDM8 88.72 2e-120 X-RAY
 2018-11-07 ARG D:69 D:72 90.0 0.4 E -90.9 123.3 90.0 0.4 0.0
ARG H:69 H:72 64.0 0.284 E -96.0 109.1 NA NA NA
6ewc 4 A0A0G2JQ44 88.72 2e-120 X-RAY
 2018-11-07 ARG D:69 D:72 73.0 0.324 E -90.7 117.3 73.0 0.324 0.0
ARG H:69 H:72 68.0 0.302 E -90.7 118.7 NA NA NA
6ewo 4 D9IDM8 88.72 2e-120 X-RAY
 2018-11-07 ARG D:69 D:72 89.0 0.396 E -103.6 114.9 89.0 0.396 0.0 HOH
 7.304
 O
 O
ARG H:69 H:72 71.0 0.316 E -104.8 106.9 NA NA NA
1vdg 1 Q8NHL6 88.27 3e-120 X-RAY
 2005-08-02 ARG A:72 A:72 69.0 0.307 E -96.2 121.5 38.0 0.169 0.138 B:Q8NHL6:0.138
 HOH
 3.611
 NH2
 O
ARG B:72 B:72 66.0 0.293 E -95.2 115.1 32.0 0.142 0.151 A:Q8NHL6:0.151
 HOH
 2.591
 NH1
 O
5knm 3 Q8NHL6 87.88 3e-120 X-RAY
 2017-06-14 ARG C:141 D:72 82.0 0.364 E -90.7 140.7 82.0 0.364 0.0
2otp 1 Q8N149 83.84 4e-112 X-RAY
 2008-02-19 ARG A:71 A:71 127.0 0.564 E -90.1 152.8 113.0 0.502 0.062 B:Q8N149:0.062
 HOH
 3.493
 NH1
 O
ARG B:71 B:71 99.0 0.44 E -75.5 143.6 79.0 0.351 0.089 A:Q8N149:0.089
 HOH
 4.962
 NH2
 O
2gw5 1 Q8N423 80.3 5e-106 X-RAY
 2006-06-20 ARG A:72 A:72 90.0 0.4 E -102.1 121.1 90.0 0.4 0.0 IPA
HOH
 3.633
3.070
 O
NH1
 C3
O
6bcs 1 A0A0G2JNQ7 80.3 6e-106 X-RAY
 2018-09-05 ARG A:73 A:72 94.0 0.418 E -93.0 124.6 94.0 0.418 0.0 BEN
BEN
DMS
HOH
 3.363
9.480
3.231
2.824
 O
CG
NH1
N
 C4
C3
O
O
2dyp 4 Q8N423 80.2 2e-105 X-RAY
 2006-11-07 ARG D:72 D:72 76.0 0.338 E -102.4 117.6 76.0 0.338 0.0 HOH
 2.866
 N
 O
3q2c 1 Q8N6C8 98.97 3e-63 X-RAY
 2011-07-13 ARG A:72 A:72 101.0 0.449 E -101.7 118.5 101.0 0.449 0.0 HOH
 2.575
 NE
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n6c8-f1 1 Q8N6C8 100.0 0.0 ARG A:95 A:95 84.0 0.373 E -94.1 120.3
af-o75019-f1 1 O75019 85.39 0.0 ARG A:95 A:95 86.0 0.382 E -92.4 116.8
af-q8nhl6-f1 1 Q8NHL6 86.4 0.0 ARG A:95 A:95 75.0 0.333 E -93.2 117.5
af-q8n149-f1 1 Q8N149 81.84 0.0 ARG A:94 A:94 79.0 0.351 E -107.9 127.2
af-q8n423-f1 1 Q8N423 81.12 0.0 ARG A:95 A:95 35.0 0.156 E -94.4 123.6