Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54803556 . A C CCDS12887.1:NM_006865.3:c.268Tgg>Ggg_NP_006856.3:p.90W>G Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3 (LILRA3), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6zdx 2 A0A0G2JQ46 85.71 0.0 X-RAY
2020-07-22 TRP B:98 B:67 143.0 0.561 T -52.6 -22.0 52.0 0.204 0.357 A:Q8I4N9:0.357
6aee 4 A0A0G2JQ44 86.22 0.0 X-RAY
2019-07-31 TRP G:66 G:67 72.0 0.282 T -70.9 -23.0 43.0 0.169 0.113 B:P61769:0.114
TRP H:66 H:67 72.0 0.282 G -67.0 -17.0 NA NA NA
6aed 1 Q8N423 81.36 0.0 X-RAY
2019-07-31 TRP A:67 A:67 168.0 0.659 T -88.5 21.3 168.0 0.659 0.0
3d2u 3 Q8NHL6 88.38 3e-121 X-RAY
2008-07-08 TRP C:67 D:67 68.0 0.267 G -60.4 -35.8 24.0 0.094 0.173 B:P61769:0.173
HOH
2.720
O
O
TRP F:67 H:67 83.0 0.325 G -56.1 -35.4 NA NA NA
6k60 4 A0A0G2JQ44 88.78 5e-121 X-RAY
2019-11-27 TRP D:68 D:67 127.0 0.498 G -62.0 -20.5 60.0 0.235 0.263 B:P61769:0.263
TRP H:68 H:67 129.0 0.506 G -57.4 -34.6 NA NA NA
1g0x 1 Q8NHL6 88.78 9e-121 X-RAY
2001-01-17 TRP A:66 A:67 62.0 0.243 G -53.8 -36.3 62.0 0.243 0.0 HOH
2.839
O
O
1p7q 4 Q8NHL6 88.78 9e-121 X-RAY
2003-10-14 TRP D:66 D:67 126.0 0.494 T -41.5 -33.7 46.0 0.18 0.314 B:P61769:0.314
1ufu 1 Q8NHL6 88.78 9e-121 X-RAY
2004-08-10 TRP A:66 A:67 98.0 0.384 T -65.9 -11.6 98.0 0.384 0.0
1ugn 1 Q8NHL6 87.88 2e-120 X-RAY
2004-08-10 TRP A:67 A:67 112.0 0.439 G -54.8 -33.2 112.0 0.439 0.0 HOH
2.903
N
O
4no0 4 Q8NHL6 88.72 2e-120 X-RAY
2014-11-19 TRP D:64 D:67 142.0 0.557 G -61.5 -30.1 63.0 0.247 0.31 B:P61769:0.31
HOH
4.727
CZ3
O
6ewa 4 D9IDM8 88.72 2e-120 X-RAY
2018-11-07 TRP D:64 D:67 129.0 0.506 G -58.9 -29.4 49.0 0.192 0.314 B:P61769:0.314
HOH
6.939
CH2
O
TRP H:64 H:67 124.0 0.486 G -57.4 -28.8 NA NA NA
6ewc 4 A0A0G2JQ44 88.72 2e-120 X-RAY
2018-11-07 TRP D:64 D:67 133.0 0.522 G -56.2 -22.6 57.0 0.224 0.298 B:P61769:0.298
TRP H:64 H:67 133.0 0.522 G -56.8 -22.5 NA NA NA
6ewo 4 D9IDM8 88.72 2e-120 X-RAY
2018-11-07 TRP D:64 D:67 130.0 0.51 G -50.6 -30.3 50.0 0.196 0.314 B:P61769:0.314
HOH
3.818
CD1
O
TRP H:64 H:67 136.0 0.533 G -59.7 -27.8 NA NA NA
1vdg 1 Q8NHL6 88.27 3e-120 X-RAY
2005-08-02 TRP A:67 A:67 79.0 0.31 G -49.2 -31.2 79.0 0.31 0.0 HOH
3.842
CG
O
TRP B:67 B:67 80.0 0.314 G -57.0 -44.6 80.0 0.314 0.0 HOH
3.045
CD1
O
5knm 3 Q8NHL6 87.88 3e-120 X-RAY
2017-06-14 TRP C:136 D:67 168.0 0.659 G -70.9 -21.4 82.0 0.322 0.337 B:P61769:0.337
2otp 1 Q8N149 83.84 4e-112 X-RAY
2008-02-19 TRP A:66 A:66 125.0 0.49 S -74.4 -34.7 108.0 0.424 0.066 B:Q8N149:0.067
HOH
5.939
O
O
TRP B:66 B:66 98.0 0.384 G -48.2 -47.6 82.0 0.322 0.062 A:Q8N149:0.063
HOH
5.954
O
O
2gw5 1 Q8N423 80.3 5e-106 X-RAY
2006-06-20 TRP A:67 A:67 158.0 0.62 T -24.3 -48.2 158.0 0.62 0.0 HOH
4.237
CZ2
O
6bcs 1 A0A0G2JNQ7 80.3 6e-106 X-RAY
2018-09-05 TRP A:68 A:67 146.0 0.573 G -57.1 -28.9 146.0 0.573 0.0 CL
DMS
HOH
3.194
3.889
4.876
N
CB
CZ2
CL
O
O
2dyp 4 Q8N423 80.2 2e-105 X-RAY
2006-11-07 TRP D:67 D:67 96.0 0.376 G -34.5 -50.4 27.0 0.106 0.27 B:P61769:0.271
HOH
3.056
NE1
O
3q2c 1 Q8N6C8 98.97 3e-63 X-RAY
2011-07-13 TRP A:67 A:67 145.0 0.569 G -62.4 -39.9 145.0 0.569 0.0 HOH
2.986
CD1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n6c8-f1 1 Q8N6C8 100.0 0.0 TRP A:90 A:90 152.0 0.596 G -54.7 -23.5
af-o75019-f1 1 O75019 85.39 0.0 TRP A:90 A:90 143.0 0.561 G -54.0 -28.7
af-q8nhl6-f1 1 Q8NHL6 86.4 0.0 TRP A:90 A:90 126.0 0.494 G -52.9 -29.8
af-q8n149-f1 1 Q8N149 81.84 0.0 TRP A:89 A:89 142.0 0.557 G -53.6 -29.3
af-q8n423-f1 1 Q8N423 81.12 0.0 TRP A:90 A:90 155.0 0.608 G -55.2 -29.3