Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54803567 . A C CCDS12887.1:NM_006865.3:c.257cTa>cGa_NP_006856.3:p.86L>R Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3 (LILRA3), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6zdx 2 A0A0G2JQ46 85.71 0.0 X-RAY
2020-07-22 PRO B:94 B:63 112.0 0.772 S -61.7 -47.3 112.0 0.772 0.0
6aee 4 A0A0G2JQ44 86.22 0.0 X-RAY
2019-07-31 PRO G:62 G:63 114.0 0.786 S -63.1 -35.0 114.0 0.786 0.0
PRO H:62 H:63 111.0 0.766 S -71.3 -41.3 NA NA NA
6aed 1 Q8N423 81.36 0.0 X-RAY
2019-07-31 PRO A:63 A:63 89.0 0.614 S -65.3 -49.2 89.0 0.614 0.0
3d2u 3 Q8NHL6 88.38 3e-121 X-RAY
2008-07-08 PRO C:63 D:63 110.0 0.759 S -62.6 -30.9 110.0 0.759 0.0 HOH
2.898
O
O
PRO F:63 H:63 113.0 0.779 S -62.5 -31.3 NA NA NA
6k60 4 A0A0G2JQ44 88.78 5e-121 X-RAY
2019-11-27 PRO D:64 D:63 108.0 0.745 S -58.8 -54.4 108.0 0.745 0.0
PRO H:64 H:63 116.0 0.8 S -77.6 -9.1 NA NA NA
1g0x 1 Q8NHL6 88.78 9e-121 X-RAY
2001-01-17 PRO A:62 A:63 110.0 0.759 S -57.9 -35.7 110.0 0.759 0.0 HOH
2.710
O
O
1p7q 4 Q8NHL6 88.78 9e-121 X-RAY
2003-10-14 PRO D:62 D:63 107.0 0.738 S -67.1 -97.1 107.0 0.738 0.0
1ufu 1 Q8NHL6 88.78 9e-121 X-RAY
2004-08-10 PRO A:62 A:63 112.0 0.772 S -63.9 -27.8 112.0 0.772 0.0
1ugn 1 Q8NHL6 87.88 2e-120 X-RAY
2004-08-10 PRO A:63 A:63 110.0 0.759 S -54.8 -37.1 110.0 0.759 0.0 HOH
2.798
O
O
4no0 4 Q8NHL6 88.72 2e-120 X-RAY
2014-11-19 PRO D:60 D:63 115.0 0.793 S -39.0 -55.7 115.0 0.793 0.0
6ewa 4 D9IDM8 88.72 2e-120 X-RAY
2018-11-07 PRO D:60 D:63 113.0 0.779 S -66.6 -51.3 113.0 0.779 0.0
PRO H:60 H:63 112.0 0.772 S -69.8 -41.4 NA NA NA
6ewc 4 A0A0G2JQ44 88.72 2e-120 X-RAY
2018-11-07 PRO D:60 D:63 113.0 0.779 S -66.2 -46.2 113.0 0.779 0.0
PRO H:60 H:63 113.0 0.779 S -65.7 -44.5 NA NA NA
6ewo 4 D9IDM8 88.72 2e-120 X-RAY
2018-11-07 PRO D:60 D:63 116.0 0.8 S -57.2 -55.2 116.0 0.8 0.0 HOH
3.141
CD
O
PRO H:60 H:63 114.0 0.786 S -71.1 -31.4 NA NA NA
1vdg 1 Q8NHL6 88.27 3e-120 X-RAY
2005-08-02 PRO A:63 A:63 108.0 0.745 S -52.5 -43.7 108.0 0.745 0.0
PRO B:63 B:63 110.0 0.759 S -49.8 -54.0 110.0 0.759 0.0 HOH
3.267
CD
O
5knm 3 Q8NHL6 87.88 3e-120 X-RAY
2017-06-14 PRO C:132 D:63 107.0 0.738 S -56.5 130.6 107.0 0.738 0.0
2otp 1 Q8N149 83.84 4e-112 X-RAY
2008-02-19 PRO A:62 A:62 106.0 0.731 S -58.4 -74.9 106.0 0.731 0.0 HOH
4.316
CD
O
PRO B:62 B:62 95.0 0.655 S -46.8 -69.7 95.0 0.655 0.0 HOH
7.055
O
O
2gw5 1 Q8N423 80.3 5e-106 X-RAY
2006-06-20 PRO A:63 A:63 100.0 0.69 S -86.4 -58.9 100.0 0.69 0.0 HOH
2.281
O
O
6bcs 1 A0A0G2JNQ7 80.3 6e-106 X-RAY
2018-09-05 PRO A:64 A:63 86.0 0.593 S -65.6 -35.8 86.0 0.593 0.0 HOH
3.498
CD
O
2dyp 4 Q8N423 80.2 2e-105 X-RAY
2006-11-07 PRO D:63 D:63 88.0 0.607 S -58.7 -50.0 88.0 0.607 0.0 HOH
7.344
O
O
3q2c 1 Q8N6C8 98.97 3e-63 X-RAY
2011-07-13 LEU A:63 A:63 142.0 0.835 S -70.9 -43.3 142.0 0.835 0.0 HOH
3.195
N
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n6c8-f1 1 Q8N6C8 100.0 0.0 LEU A:86 A:86 155.0 0.912 S -70.8 -34.8
af-o75019-f1 1 O75019 85.39 0.0 PRO A:86 A:86 111.0 0.766 S -64.0 -33.2
af-q8nhl6-f1 1 Q8NHL6 86.4 0.0 PRO A:86 A:86 112.0 0.772 S -64.5 -34.4
af-q8n149-f1 1 Q8N149 81.84 0.0 PRO A:85 A:85 109.0 0.752 S -61.8 -30.5
af-q8n423-f1 1 Q8N423 81.12 0.0 PRO A:86 A:86 95.0 0.655 S -71.9 -30.7