Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55085771 . A C CCDS12900.1:NM_006866.2:c.74cAc>cCc_NP_006857.1:p.25H>P Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aee 4 A0A0G2JQ44 80.41 0.0 X-RAY
2019-07-31 HIS G:1 G:2 75.0 0.385 360.0 -36.1 75.0 0.385 0.0
HIS H:1 H:2 53.0 0.272 360.0 -43.8 NA NA NA
2otp 1 Q8N149 99.49 6e-142 X-RAY
2008-02-19 HIS A:2 NA:NA DO NA DO DO DO NA NA NA
HIS B:2 NA:NA DO NA DO DO DO NA NA NA
3d2u 3 Q8NHL6 80.81 2e-104 X-RAY
2008-07-08 HIS C:2 NA:NA DO NA DO DO DO NA NA NA
HIS F:2 H:2 177.0 0.908 360.0 149.4 NA NA NA
6k60 4 A0A0G2JQ44 81.12 3e-104 X-RAY
2019-11-27 HIS D:3 NA:NA DO NA DO DO DO NA NA NA
HIS H:3 NA:NA DO NA DO DO DO NA NA NA
1ugn 1 Q8NHL6 80.3 8e-104 X-RAY
2004-08-10 HIS A:2 A:2 157.0 0.805 -156.6 98.0 157.0 0.805 0.0 HOH
3.030
CD2
O
1g0x 1 Q8NHL6 80.71 1e-103 X-RAY
2001-01-17 HIS A:1 A:2 93.0 0.477 360.0 99.5 93.0 0.477 0.0 HOH
2.398
ND1
O
1p7q 4 Q8NHL6 80.71 1e-103 X-RAY
2003-10-14 HIS D:1 NA:NA DO NA DO DO DO NA NA NA
1ufu 1 Q8NHL6 80.71 1e-103 X-RAY
2004-08-10 HIS A:1 A:2 121.0 0.621 360.0 9.8 121.0 0.621 0.0
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
2005-08-02 HIS A:2 A:2 154.0 0.79 -134.5 95.4 33.0 0.169 0.621 B:Q8NHL6:0.621
HOH
4.203
CB
O
HIS B:2 B:2 155.0 0.795 -133.7 116.4 48.0 0.246 0.549 A:Q8NHL6:0.549
HOH
5.100
NE2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n149-f1 1 Q8N149 100.0 0.0 HIS A:25 A:25 131.0 0.672 -45.4 121.2
af-q8n6c8-f1 1 Q8N6C8 81.84 0.0 PRO A:25 A:25 123.0 0.848 -53.6 138.2
af-q8nhl6-f1 1 Q8NHL6 81.15 0.0 HIS A:25 A:25 134.0 0.687 -52.1 114.2