Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55085873 . A C CCDS12900.1:NM_006866.2:c.176cAt>cCt_NP_006857.1:p.59H>P Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aee 4 A0A0G2JQ44 80.41 0.0 X-RAY
 2019-07-31 ARG G:35 G:36 147.0 0.653 E -143.0 115.0 140.0 0.622 0.031 A:P17693:0.031
ARG H:35 H:36 151.0 0.671 E -152.9 132.9 NA NA NA
2otp 1 Q8N149 99.49 6e-142 X-RAY
 2008-02-19 HIS A:36 A:36 38.0 0.195 -175.0 131.5 38.0 0.195 0.0 HOH
 8.599
 CE1
 O
HIS B:36 B:36 63.0 0.323 -159.7 148.5 63.0 0.323 0.0 HOH
 2.497
 ND1
 O
3d2u 3 Q8NHL6 80.81 2e-104 X-RAY
 2008-07-08 ARG C:36 D:36 100.0 0.444 E -135.0 135.0 67.0 0.298 0.146 A:Q4A1U8:0.147
 HOH
 3.652
 CA
 O
ARG F:36 H:36 96.0 0.427 E -137.7 141.6 NA NA NA
6k60 4 A0A0G2JQ44 81.12 3e-104 X-RAY
 2019-11-27 ARG D:37 D:36 142.0 0.631 E -136.9 133.1 142.0 0.631 0.0
ARG H:37 NA:NA DO NA DO DO DO NA NA NA
1ugn 1 Q8NHL6 80.3 8e-104 X-RAY
 2004-08-10 ARG A:36 A:36 116.0 0.516 E -136.2 129.5 116.0 0.516 0.0 HOH
 3.502
 CA
 O
1g0x 1 Q8NHL6 80.71 1e-103 X-RAY
 2001-01-17 ARG A:35 A:36 115.0 0.511 E -132.7 110.5 115.0 0.511 0.0 HOH
 2.752
 CD
 O
1p7q 4 Q8NHL6 80.71 1e-103 X-RAY
 2003-10-14 ARG D:35 D:36 164.0 0.729 E -112.2 147.8 144.0 0.64 0.089 A:P01892:0.089
1ufu 1 Q8NHL6 80.71 1e-103 X-RAY
 2004-08-10 ARG A:35 A:36 116.0 0.516 E -130.6 127.8 116.0 0.516 0.0
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 ARG A:36 A:36 118.0 0.524 E -139.1 104.6 118.0 0.524 0.0 HOH
 8.127
 C
 O
ARG B:36 B:36 146.0 0.649 E -142.5 112.8 146.0 0.649 0.0 HOH
 3.852
 NH1
 O
4no0 4 Q8NHL6 80.51 5e-102 X-RAY
 2014-11-19 ARG D:33 D:36 105.0 0.467 E -121.8 113.6 101.0 0.449 0.018 A:P01892:0.018
 HOH
 6.766
 C
 O
6ewa 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 ARG D:33 D:36 190.0 0.844 -155.4 72.9 190.0 0.844 0.0
ARG H:33 H:36 141.0 0.627 E -145.4 99.9 NA NA NA
6ewc 4 A0A0G2JQ44 80.51 5e-102 X-RAY
 2018-11-07 ARG D:33 D:36 162.0 0.72 -145.9 -93.2 158.0 0.702 0.018 A:P01892:0.018
ARG H:33 H:36 149.0 0.662 E -133.9 117.3 NA NA NA
6ewo 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 ARG D:33 D:36 86.0 0.382 E -144.8 110.9 86.0 0.382 0.0 HOH
 9.072
 O
 O
ARG H:33 H:36 164.0 0.729 -139.5 108.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n149-f1 1 Q8N149 100.0 0.0 HIS A:59 A:59 21.0 0.108 E -113.0 126.9
af-q8n6c8-f1 1 Q8N6C8 81.84 0.0 HIS A:59 A:59 89.0 0.456 E -126.8 122.0
af-q8nhl6-f1 1 Q8NHL6 81.15 0.0 ARG A:59 A:59 110.0 0.489 E -134.5 130.7