Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55085882 . G A CCDS12900.1:NM_006866.2:c.185aGg>aAg_NP_006857.1:p.62R>K Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aee 4 A0A0G2JQ44 80.41 0.0 X-RAY
 2019-07-31 ARG G:38 G:39 29.0 0.129 E -93.0 150.7 23.0 0.102 0.027 A:P17693:0.027
ARG H:38 H:39 34.0 0.151 E -87.0 159.6 NA NA NA
2otp 1 Q8N149 99.49 6e-142 X-RAY
 2008-02-19 ARG A:39 A:39 93.0 0.413 -144.5 119.2 93.0 0.413 0.0 HOH
 2.515
 NH2
 O
ARG B:39 B:39 154.0 0.684 169.7 134.3 154.0 0.684 0.0 HOH
 4.542
 O
 O
3d2u 3 Q8NHL6 80.81 2e-104 X-RAY
 2008-07-08 ARG C:39 D:39 30.0 0.133 E -96.2 133.9 23.0 0.102 0.031 A:Q4A1U8:0.031
 HOH
 3.070
 N
 O
ARG F:39 H:39 27.0 0.12 E -99.7 139.5 NA NA NA
6k60 4 A0A0G2JQ44 81.12 3e-104 X-RAY
 2019-11-27 ARG D:40 D:39 31.0 0.138 E -92.5 135.7 23.0 0.102 0.036 A:P17693:0.036
ARG H:40 H:39 25.0 0.111 E -113.3 130.0 NA NA NA
1ugn 1 Q8NHL6 80.3 8e-104 X-RAY
 2004-08-10 ARG A:39 A:39 22.0 0.098 E -104.2 139.5 22.0 0.098 0.0 HOH
 2.701
 O
 O
1g0x 1 Q8NHL6 80.71 1e-103 X-RAY
 2001-01-17 ARG A:38 A:39 33.0 0.147 E -102.9 139.2 33.0 0.147 0.0 HOH
 3.147
 N
 O
1p7q 4 Q8NHL6 80.71 1e-103 X-RAY
 2003-10-14 ARG D:38 D:39 45.0 0.2 E -102.0 114.9 40.0 0.178 0.022 A:P01892:0.022
1ufu 1 Q8NHL6 80.71 1e-103 X-RAY
 2004-08-10 ARG A:38 A:39 29.0 0.129 E -95.4 146.2 29.0 0.129 0.0
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 ARG A:39 A:39 21.0 0.093 E -94.3 135.4 21.0 0.093 0.0 HOH
 2.778
 N
 O
ARG B:39 B:39 23.0 0.102 E -104.0 150.7 23.0 0.102 0.0 HOH
 2.848
 NH1
 O
4no0 4 Q8NHL6 80.51 5e-102 X-RAY
 2014-11-19 ARG D:36 D:39 40.0 0.178 E -105.6 132.5 33.0 0.147 0.031 A:P01892:0.031
 EDO
HOH
 6.717
3.060
 O
N
 O2
O
6ewa 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 ARG D:36 D:39 32.0 0.142 E -113.9 133.9 24.0 0.107 0.035 A:P01892:0.036
ARG H:36 H:39 33.0 0.147 E -101.1 140.6 NA NA NA
6ewc 4 A0A0G2JQ44 80.51 5e-102 X-RAY
 2018-11-07 ARG D:36 D:39 35.0 0.156 E -90.8 139.5 28.0 0.124 0.032 A:P01892:0.031
ARG H:36 H:39 36.0 0.16 E -90.4 139.2 NA NA NA
6ewo 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 ARG D:36 D:39 28.0 0.124 E -113.7 133.5 20.0 0.089 0.035 A:P01892:0.036
 HOH
 2.911
 O
 O
ARG H:36 H:39 31.0 0.138 E -116.7 140.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n149-f1 1 Q8N149 100.0 0.0 ARG A:62 A:62 18.0 0.08 E -124.6 134.7
af-q8n6c8-f1 1 Q8N6C8 81.84 0.0 ARG A:62 A:62 31.0 0.138 E -100.6 134.5
af-q8nhl6-f1 1 Q8NHL6 81.15 0.0 ARG A:62 A:62 33.0 0.147 E -99.5 136.0