Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 55085920 | . | G | A | CCDS12900.1:NM_006866.2:c.223Gag>Aag_NP_006857.1:p.75E>K | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA. |
---|---|---|---|---|---|---|---|
|
|
|
|
PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6aee | 4 | A0A0G2JQ44 | 80.41 | 0.0 |
X-RAY |
2019-07-31 | GLU | G:52 | G:53 | 136.0 | 0.716 | H | -57.0 | -33.0 | 136.0 | 0.716 | 0.0 | ||||||
GLU | H:52 | H:53 | 132.0 | 0.695 | H | -62.9 | -40.8 | NA | NA | NA | |||||||||||||
2otp | 1 | Q8N149 | 99.49 | 6e-142 |
X-RAY |
2008-02-19 | GLU | A:52 | A:52 | 162.0 | 0.853 | S | -131.6 | 54.8 | 162.0 | 0.853 | 0.0 |
HOH |
2.932 |
CA |
O |
||
GLU | B:52 | B:52 | 135.0 | 0.711 | S | -137.4 | -55.7 | 135.0 | 0.711 | 0.0 |
HOH |
3.902 |
CG |
O |
|||||||||
3d2u | 3 | Q8NHL6 | 80.81 | 2e-104 |
X-RAY |
2008-07-08 | GLU | C:53 | D:53 | 124.0 | 0.653 | H | -58.7 | -42.6 | 124.0 | 0.653 | 0.0 |
HOH |
3.422 |
OE1 |
O |
||
GLU | F:53 | H:53 | 109.0 | 0.574 | H | -66.0 | -28.0 | NA | NA | NA | |||||||||||||
6k60 | 4 | A0A0G2JQ44 | 81.12 | 3e-104 |
X-RAY |
2019-11-27 | GLU | D:54 | D:53 | 140.0 | 0.737 | H | -61.3 | -32.5 | 140.0 | 0.737 | 0.0 | ||||||
GLU | H:54 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
1ugn | 1 | Q8NHL6 | 80.3 | 8e-104 |
X-RAY |
2004-08-10 | GLU | A:53 | A:53 | 130.0 | 0.684 | H | -59.8 | -34.6 | 130.0 | 0.684 | 0.0 |
HOH |
2.731 |
O |
O |
||
1g0x | 1 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2001-01-17 | GLU | A:52 | A:53 | 141.0 | 0.742 | H | -61.0 | -28.6 | 141.0 | 0.742 | 0.0 |
HOH |
2.799 |
OE1 |
O |
||
1p7q | 4 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2003-10-14 | GLU | D:52 | D:53 | 83.0 | NA | H | -70.6 | -10.2 | 83.0 | NA | NA | ||||||
1ufu | 1 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2004-08-10 | GLU | A:52 | A:53 | 137.0 | 0.721 | H | -58.3 | -37.5 | 137.0 | 0.721 | 0.0 | ||||||
1vdg | 1 | Q8NHL6 | 80.1 | 3e-102 |
X-RAY |
2005-08-02 | GLU | A:53 | A:53 | 121.0 | 0.637 | H | -53.2 | -51.7 | 121.0 | 0.637 | 0.0 |
HOH |
8.176 |
O |
O |
||
GLU | B:53 | B:53 | 138.0 | 0.726 | H | -60.2 | -42.8 | 138.0 | 0.726 | 0.0 |
HOH |
8.608 |
O |
O |
|||||||||
4no0 | 4 | Q8NHL6 | 80.51 | 5e-102 |
X-RAY |
2014-11-19 | GLU | D:50 | D:53 | 159.0 | 0.837 | T | -47.0 | -45.8 | 159.0 | 0.837 | 0.0 | ||||||
6ewa | 4 | D9IDM8 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | GLU | D:50 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
GLU | H:50 | H:53 | 143.0 | 0.753 | H | -44.0 | -43.3 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | GLU | D:50 | D:53 | 172.0 | 0.905 | H | -35.6 | -29.6 | 172.0 | 0.905 | 0.0 | ||||||
GLU | H:50 | H:53 | 164.0 | 0.863 | H | -62.1 | 9.4 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | GLU | D:50 | D:53 | 177.0 | 0.932 | H | -54.5 | -39.6 | 177.0 | 0.932 | 0.0 | ||||||
GLU | H:50 | H:53 | 157.0 | 0.826 | H | -61.6 | -42.5 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8n149-f1 | 1 | Q8N149 | 100.0 | 0.0 | GLU | A:75 | A:75 | 56.0 | 0.295 | -131.9 | 83.8 | ||
af-q8n6c8-f1 | 1 | Q8N6C8 | 81.84 | 0.0 | GLU | A:76 | A:76 | 122.0 | 0.642 | H | -62.3 | -29.6 | |
af-q8nhl6-f1 | 1 | Q8NHL6 | 81.15 | 0.0 | GLU | A:76 | A:76 | 117.0 | 0.616 | H | -64.0 | -28.8 |