Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 55086228 | . | T | A | CCDS12900.1:NM_006866.2:c.383cTg>cAg_NP_006857.1:p.128L>Q | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6aee | 4 | A0A0G2JQ44 | 80.41 | 0.0 |
X-RAY |
2019-07-31 | GLN | G:106 | G:107 | 49.0 | 0.272 | E | -126.9 | 135.0 | 49.0 | 0.272 | 0.0 | ||||||
GLN | H:106 | H:107 | 83.0 | 0.461 | E | -145.0 | 137.1 | NA | NA | NA | |||||||||||||
2otp | 1 | Q8N149 | 99.49 | 6e-142 |
X-RAY |
2008-02-19 | LEU | A:105 | A:105 | 59.0 | 0.347 | E | -115.3 | 125.2 | 59.0 | 0.347 | 0.0 |
HOH |
7.044 |
O |
O |
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LEU | B:105 | B:105 | 74.0 | 0.435 | E | -85.9 | 140.2 | 74.0 | 0.435 | 0.0 |
HOH |
5.275 |
O |
O |
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3d2u | 3 | Q8NHL6 | 80.81 | 2e-104 |
X-RAY |
2008-07-08 | GLN | C:107 | D:107 | 73.0 | 0.406 | S | -45.5 | -79.7 | 73.0 | 0.406 | 0.0 |
HOH |
5.598 |
N |
O |
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GLN | F:107 | H:107 | 115.0 | 0.639 | S | -49.2 | -59.0 | NA | NA | NA | |||||||||||||
6k60 | 4 | A0A0G2JQ44 | 81.12 | 3e-104 |
X-RAY |
2019-11-27 | GLN | D:108 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
GLN | H:108 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
1ugn | 1 | Q8NHL6 | 80.3 | 8e-104 |
X-RAY |
2004-08-10 | GLN | A:107 | A:107 | 69.0 | 0.383 | E | -126.3 | 132.7 | 69.0 | 0.383 | 0.0 |
HOH |
2.652 |
NE2 |
O |
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1g0x | 1 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2001-01-17 | GLN | A:106 | A:107 | 85.0 | 0.472 | E | -112.0 | 123.9 | 85.0 | 0.472 | 0.0 |
HOH |
2.399 |
OE1 |
O |
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1p7q | 4 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2003-10-14 | GLN | D:106 | D:107 | 70.0 | 0.389 | E | -87.3 | 123.8 | 70.0 | 0.389 | 0.0 | ||||||
1ufu | 1 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2004-08-10 | GLN | A:106 | A:107 | 78.0 | 0.433 | E | -114.8 | 117.3 | 78.0 | 0.433 | 0.0 | ||||||
1vdg | 1 | Q8NHL6 | 80.1 | 3e-102 |
X-RAY |
2005-08-02 | GLN | A:107 | A:107 | 93.0 | 0.517 | E | -111.4 | 124.9 | 93.0 | 0.517 | 0.0 |
HOH |
4.270 |
C |
O |
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GLN | B:107 | B:107 | 76.0 | 0.422 | E | -129.4 | 92.6 | 76.0 | 0.422 | 0.0 |
HOH |
3.560 |
OE1 |
O |
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4no0 | 4 | Q8NHL6 | 80.51 | 5e-102 |
X-RAY |
2014-11-19 | GLN | D:104 | D:107 | 81.0 | 0.45 | E | -123.7 | 131.7 | 81.0 | 0.45 | 0.0 |
HOH |
4.434 |
O |
O |
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6ewa | 4 | D9IDM8 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | GLN | D:104 | D:107 | 82.0 | 0.456 | E | -129.6 | 125.6 | 82.0 | 0.456 | 0.0 | ||||||
GLN | H:104 | H:107 | 78.0 | 0.433 | E | -126.0 | 122.8 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | GLN | D:104 | D:107 | 81.0 | 0.45 | E | -98.6 | 124.9 | 81.0 | 0.45 | 0.0 | ||||||
GLN | H:104 | H:107 | 82.0 | 0.456 | E | -98.1 | 124.6 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | GLN | D:104 | D:107 | 79.0 | 0.439 | E | -118.8 | 129.7 | 79.0 | 0.439 | 0.0 |
HOH |
4.810 |
O |
O |
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GLN | H:104 | H:107 | 86.0 | 0.478 | E | -127.2 | 123.7 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8n149-f1 | 1 | Q8N149 | 100.0 | 0.0 | LEU | A:128 | A:128 | 36.0 | 0.212 | E | -118.9 | 133.5 | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 81.84 | 0.0 | LEU | A:130 | A:130 | 69.0 | 0.406 | E | -115.7 | 133.8 | |
af-q8nhl6-f1 | 1 | Q8NHL6 | 81.15 | 0.0 | GLN | A:130 | A:130 | 83.0 | 0.461 | E | -112.3 | 130.1 |