Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 55086237 | . | C | A | CCDS12900.1:NM_006866.2:c.392cCt>cAt_NP_006857.1:p.131P>H | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6aee | 4 | A0A0G2JQ44 | 80.41 | 0.0 |
X-RAY |
2019-07-31 | PRO | G:109 | G:110 | 4.0 | 0.028 | S | -78.9 | 11.2 | 4.0 | 0.028 | 0.0 | ||||||
PRO | H:109 | H:110 | 11.0 | 0.076 | S | -71.1 | -14.9 | NA | NA | NA | |||||||||||||
2otp | 1 | Q8N149 | 99.49 | 6e-142 |
X-RAY |
2008-02-19 | PRO | A:108 | A:108 | 114.0 | 0.786 | S | -50.4 | -40.5 | 60.0 | 0.414 | 0.372 |
B:Q8N149:0.372 |
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PRO | B:108 | B:108 | 105.0 | 0.724 | S | -71.8 | -26.6 | 36.0 | 0.248 | 0.476 |
A:Q8N149:0.476 |
HOH |
4.660 |
C |
O |
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3d2u | 3 | Q8NHL6 | 80.81 | 2e-104 |
X-RAY |
2008-07-08 | PRO | C:110 | D:110 | 60.0 | 0.414 | S | -76.0 | -13.0 | 60.0 | 0.414 | 0.0 |
HOH |
3.786 |
CD |
O |
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PRO | F:110 | H:110 | 60.0 | 0.414 | S | -78.5 | -6.7 | NA | NA | NA | |||||||||||||
6k60 | 4 | A0A0G2JQ44 | 81.12 | 3e-104 |
X-RAY |
2019-11-27 | PRO | D:111 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
PRO | H:111 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
1ugn | 1 | Q8NHL6 | 80.3 | 8e-104 |
X-RAY |
2004-08-10 | PRO | A:110 | A:110 | 47.0 | 0.324 | S | -74.1 | -12.4 | 47.0 | 0.324 | 0.0 |
HOH |
3.031 |
CG |
O |
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1g0x | 1 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2001-01-17 | PRO | A:109 | A:110 | 54.0 | 0.372 | S | -71.4 | -22.6 | 54.0 | 0.372 | 0.0 |
HOH |
2.961 |
CG |
O |
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1p7q | 4 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2003-10-14 | PRO | D:109 | D:110 | 58.0 | 0.4 | S | -66.8 | -8.1 | 58.0 | 0.4 | 0.0 | ||||||
1ufu | 1 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2004-08-10 | PRO | A:109 | A:110 | 59.0 | 0.407 | S | -72.9 | -14.4 | 59.0 | 0.407 | 0.0 | ||||||
1vdg | 1 | Q8NHL6 | 80.1 | 3e-102 |
X-RAY |
2005-08-02 | PRO | A:110 | A:110 | 47.0 | 0.324 | S | -71.6 | -23.1 | 47.0 | 0.324 | 0.0 |
HOH |
4.871 |
N |
O |
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PRO | B:110 | B:110 | 46.0 | 0.317 | S | -58.7 | -10.0 | 46.0 | 0.317 | 0.0 |
HOH |
9.633 |
CD |
O |
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4no0 | 4 | Q8NHL6 | 80.51 | 5e-102 |
X-RAY |
2014-11-19 | PRO | D:107 | D:110 | 59.0 | 0.407 | S | -79.0 | -7.3 | 59.0 | 0.407 | 0.0 |
HOH |
4.193 |
CD |
O |
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6ewa | 4 | D9IDM8 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | PRO | D:107 | D:110 | 53.0 | 0.366 | S | -74.0 | -8.6 | 53.0 | 0.366 | 0.0 |
HOH |
7.307 |
CB |
O |
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PRO | H:107 | H:110 | 54.0 | 0.372 | S | -74.5 | -9.7 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | PRO | D:107 | D:110 | 56.0 | 0.386 | S | -66.6 | -15.2 | 56.0 | 0.386 | 0.0 | ||||||
PRO | H:107 | H:110 | 57.0 | 0.393 | S | -65.7 | -16.1 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | PRO | D:107 | D:110 | 56.0 | 0.386 | S | -78.1 | -5.1 | 56.0 | 0.386 | 0.0 |
HOH |
4.758 |
N |
O |
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PRO | H:107 | H:110 | 54.0 | 0.372 | S | -78.9 | -5.1 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8n149-f1 | 1 | Q8N149 | 100.0 | 0.0 | PRO | A:131 | A:131 | 0.0 | 0.0 | S | -78.8 | -12.8 | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 81.84 | 0.0 | PRO | A:133 | A:133 | 0.0 | 0.0 | S | -73.4 | -13.5 | |
af-q8nhl6-f1 | 1 | Q8NHL6 | 81.15 | 0.0 | PRO | A:133 | A:133 | 1.0 | 0.007 | S | -71.4 | -12.4 |