Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55086245 . A C CCDS12900.1:NM_006866.2:c.400Acc>Ccc_NP_006857.1:p.134T>P Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aee 4 A0A0G2JQ44 80.41 0.0 X-RAY
 2019-07-31 ASN G:112 G:113 128.0 0.8 -89.4 -58.0 128.0 0.8 0.0
ASN H:112 H:113 116.0 0.725 -67.0 149.0 NA NA NA
2otp 1 Q8N149 99.49 6e-142 X-RAY
 2008-02-19 THR A:111 A:111 117.0 0.836 -67.0 166.7 71.0 0.507 0.329 B:Q8N149:0.329
 HOH
 7.681
 C
 O
THR B:111 B:111 107.0 0.764 -76.4 150.6 64.0 0.457 0.307 A:Q8N149:0.307
 HOH
 2.676
 OG1
 O
3d2u 3 Q8NHL6 80.81 2e-104 X-RAY
 2008-07-08 ASN C:113 D:113 103.0 0.644 -81.3 170.4 103.0 0.644 0.0 HOH
 6.727
 CA
 O
ASN F:113 H:113 116.0 0.725 E -68.1 142.9 NA NA NA
6k60 4 A0A0G2JQ44 81.12 3e-104 X-RAY
 2019-11-27 ASN D:114 NA:NA DO NA DO DO DO NA NA NA
ASN H:114 NA:NA DO NA DO DO DO NA NA NA
1ugn 1 Q8NHL6 80.3 8e-104 X-RAY
 2004-08-10 ASN A:113 A:113 109.0 0.681 E -83.4 150.1 109.0 0.681 0.0 HOH
 2.944
 OD1
 O
1g0x 1 Q8NHL6 80.71 1e-103 X-RAY
 2001-01-17 ASN A:112 A:113 121.0 0.756 E -80.5 152.0 121.0 0.756 0.0 HOH
 2.713
 ND2
 O
1p7q 4 Q8NHL6 80.71 1e-103 X-RAY
 2003-10-14 ASN D:112 D:113 117.0 0.731 E -74.4 147.2 117.0 0.731 0.0
1ufu 1 Q8NHL6 80.71 1e-103 X-RAY
 2004-08-10 ASN A:112 A:113 146.0 0.912 -67.4 144.0 146.0 0.912 0.0
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 ASN A:113 A:113 112.0 0.7 -77.2 142.4 112.0 0.7 0.0 HOH
 2.854
 N
 O
ASN B:113 B:113 120.0 0.75 -68.7 134.7 120.0 0.75 0.0 HOH
 3.503
 ND2
 O
4no0 4 Q8NHL6 80.51 5e-102 X-RAY
 2014-11-19 ASN D:110 D:113 113.0 0.706 E -65.1 148.1 113.0 0.706 0.0 HOH
 2.689
 N
 O
6ewa 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 ASN D:110 D:113 122.0 0.762 E -72.5 141.7 122.0 0.762 0.0 HOH
 7.589
 O
 O
ASN H:110 H:113 111.0 0.694 E -80.4 153.2 NA NA NA
6ewc 4 A0A0G2JQ44 80.51 5e-102 X-RAY
 2018-11-07 ASN D:110 D:113 117.0 0.731 E -77.9 140.8 117.0 0.731 0.0
ASN H:110 H:113 116.0 0.725 E -79.5 140.8 NA NA NA
6ewo 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 ASN D:110 D:113 115.0 0.719 E -73.7 138.2 115.0 0.719 0.0 HOH
 6.078
 N
 O
ASN H:110 H:113 112.0 0.7 E -77.2 144.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n149-f1 1 Q8N149 100.0 0.0 THR A:134 A:134 108.0 0.771 -69.4 146.6
af-q8n6c8-f1 1 Q8N6C8 81.84 0.0 THR A:136 A:136 107.0 0.764 -67.3 144.8
af-q8nhl6-f1 1 Q8NHL6 81.15 0.0 ASN A:136 A:136 110.0 0.688 E -65.9 143.4