Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 55086248 | . | T | A | CCDS12900.1:NM_006866.2:c.403Tta>Ata_NP_006857.1:p.135L>I | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6aee | 4 | A0A0G2JQ44 | 80.41 | 0.0 |
X-RAY |
2019-07-31 | SER | G:113 | G:114 | 81.0 | 0.704 | S | -171.6 | 148.8 | 81.0 | 0.704 | 0.0 | ||||||
SER | H:113 | H:114 | 94.0 | 0.817 | T | -63.0 | 146.9 | NA | NA | NA | |||||||||||||
2otp | 1 | Q8N149 | 99.49 | 6e-142 |
X-RAY |
2008-02-19 | LEU | A:112 | A:112 | 187.0 | 1.0 | T | -66.3 | 108.6 | 116.0 | 0.682 | 0.318 |
B:Q8N149:0.418 |
HOH |
3.242 |
CD2 |
O |
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LEU | B:112 | B:112 | 191.0 | 1.0 | T | -60.0 | 86.7 | 83.0 | 0.488 | 0.512 |
A:Q8N149:0.635 |
HOH |
4.629 |
O |
O |
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3d2u | 3 | Q8NHL6 | 80.81 | 2e-104 |
X-RAY |
2008-07-08 | SER | C:114 | D:114 | 64.0 | 0.557 | T | -75.5 | 150.4 | 64.0 | 0.557 | 0.0 |
HOH |
4.731 |
OG |
O |
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SER | F:114 | H:114 | 58.0 | 0.504 | T | -60.1 | 136.8 | NA | NA | NA | |||||||||||||
6k60 | 4 | A0A0G2JQ44 | 81.12 | 3e-104 |
X-RAY |
2019-11-27 | SER | D:115 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
SER | H:115 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
1ugn | 1 | Q8NHL6 | 80.3 | 8e-104 |
X-RAY |
2004-08-10 | SER | A:114 | A:114 | 66.0 | 0.574 | T | -56.4 | 137.3 | 66.0 | 0.574 | 0.0 |
HOH |
2.675 |
O |
O |
||
1g0x | 1 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2001-01-17 | SER | A:113 | A:114 | 68.0 | 0.591 | T | -59.6 | 144.3 | 68.0 | 0.591 | 0.0 |
HOH |
5.073 |
O |
O |
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1p7q | 4 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2003-10-14 | SER | D:113 | D:114 | 53.0 | 0.461 | S | -45.6 | 111.2 | 53.0 | 0.461 | 0.0 | ||||||
1ufu | 1 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2004-08-10 | SER | A:113 | A:114 | 106.0 | 0.922 | T | -51.9 | 160.6 | 106.0 | 0.922 | 0.0 | ||||||
1vdg | 1 | Q8NHL6 | 80.1 | 3e-102 |
X-RAY |
2005-08-02 | SER | A:114 | A:114 | 68.0 | 0.591 | T | -49.0 | 127.9 | 68.0 | 0.591 | 0.0 |
HOH |
5.869 |
N |
O |
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SER | B:114 | B:114 | 63.0 | 0.548 | T | -50.0 | 144.5 | 63.0 | 0.548 | 0.0 |
HOH |
6.555 |
O |
O |
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4no0 | 4 | Q8NHL6 | 80.51 | 5e-102 |
X-RAY |
2014-11-19 | SER | D:111 | D:114 | 61.0 | 0.53 | T | -48.9 | 141.1 | 61.0 | 0.53 | 0.0 |
HOH |
3.106 |
OG |
O |
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6ewa | 4 | D9IDM8 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | SER | D:111 | D:114 | 57.0 | 0.496 | T | -46.3 | 137.9 | 57.0 | 0.496 | 0.0 |
HOH |
5.420 |
OG |
O |
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SER | H:111 | H:114 | 53.0 | 0.461 | T | -50.8 | 141.3 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | SER | D:111 | D:114 | 55.0 | 0.478 | T | -53.3 | 122.3 | 55.0 | 0.478 | 0.0 | ||||||
SER | H:111 | H:114 | 52.0 | 0.452 | T | -53.5 | 124.5 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | SER | D:111 | D:114 | 61.0 | 0.53 | T | -44.8 | 134.3 | 61.0 | 0.53 | 0.0 |
HOH |
9.400 |
N |
O |
||
SER | H:111 | H:114 | 61.0 | 0.53 | T | -52.6 | 136.4 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8n149-f1 | 1 | Q8N149 | 100.0 | 0.0 | LEU | A:135 | A:135 | 120.0 | 0.706 | T | -51.2 | 131.4 | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 81.84 | 0.0 | SER | A:137 | A:137 | 74.0 | 0.643 | T | -54.4 | 133.6 | |
af-q8nhl6-f1 | 1 | Q8NHL6 | 81.15 | 0.0 | SER | A:137 | A:137 | 62.0 | 0.539 | T | -50.9 | 132.3 |