Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55086263 . A C CCDS12900.1:NM_006866.2:c.418Acc>Ccc_NP_006857.1:p.140T>P Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aee 4 A0A0G2JQ44 80.41 0.0 X-RAY
 2019-07-31 THR G:118 G:119 54.0 0.386 E -109.0 119.0 54.0 0.386 0.0
THR H:118 H:119 44.0 0.314 E -117.0 137.0 NA NA NA
2otp 1 Q8N149 99.49 6e-142 X-RAY
 2008-02-19 THR A:117 A:117 92.0 0.657 E -103.3 112.0 41.0 0.293 0.364 B:Q8N149:0.364
 HOH
 5.452
 OG1
 O
THR B:117 B:117 91.0 0.65 E -136.4 87.8 25.0 0.179 0.471 A:Q8N149:0.471
 HOH
 6.711
 N
 O
3d2u 3 Q8NHL6 80.81 2e-104 X-RAY
 2008-07-08 THR C:119 D:119 49.0 0.35 E -95.4 120.9 49.0 0.35 0.0 HOH
 7.332
 O
 O
THR F:119 H:119 43.0 0.307 E -102.2 127.5 NA NA NA
6k60 4 A0A0G2JQ44 81.12 3e-104 X-RAY
 2019-11-27 THR D:120 D:119 127.0 0.907 -86.9 123.2 127.0 0.907 0.0
THR H:120 NA:NA DO NA DO DO DO NA NA NA
1ugn 1 Q8NHL6 80.3 8e-104 X-RAY
 2004-08-10 THR A:119 A:119 52.0 0.371 E -97.5 126.8 52.0 0.371 0.0 HOH
 4.002
 OG1
 O
1g0x 1 Q8NHL6 80.71 1e-103 X-RAY
 2001-01-17 THR A:118 A:119 54.0 0.386 E -98.4 124.7 54.0 0.386 0.0 HOH
 3.389
 OG1
 O
1p7q 4 Q8NHL6 80.71 1e-103 X-RAY
 2003-10-14 THR D:118 D:119 49.0 0.35 E -149.9 115.5 49.0 0.35 0.0
1ufu 1 Q8NHL6 80.71 1e-103 X-RAY
 2004-08-10 THR A:118 A:119 48.0 0.343 E -105.5 129.5 48.0 0.343 0.0
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 ILE A:119 A:119 74.0 0.423 E -92.4 123.3 41.0 0.234 0.189 B:Q8NHL6:0.189
 HOH
 5.911
 N
 O
ILE B:119 B:119 60.0 0.343 E -100.4 128.2 24.0 0.137 0.206 A:Q8NHL6:0.206
 HOH
 8.047
 N
 O
4no0 4 Q8NHL6 80.51 5e-102 X-RAY
 2014-11-19 THR D:116 D:119 61.0 0.436 E -97.7 124.7 61.0 0.436 0.0 HOH
 3.637
 CG2
 O
6ewa 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 THR D:116 D:119 55.0 0.393 E -92.5 128.0 55.0 0.393 0.0
THR H:116 H:119 60.0 0.429 E -100.2 129.5 NA NA NA
6ewc 4 A0A0G2JQ44 80.51 5e-102 X-RAY
 2018-11-07 THR D:116 D:119 46.0 0.329 E -100.7 122.7 46.0 0.329 0.0
THR H:116 H:119 46.0 0.329 E -102.4 122.3 NA NA NA
6ewo 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 THR D:116 D:119 52.0 0.371 E -102.0 116.5 52.0 0.371 0.0 HOH
 3.119
 OG1
 O
THR H:116 H:119 55.0 0.393 E -93.9 127.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n149-f1 1 Q8N149 100.0 0.0 THR A:140 A:140 51.0 0.364 E -96.9 123.3
af-q8n6c8-f1 1 Q8N6C8 81.84 0.0 THR A:142 A:142 53.0 0.379 E -90.9 120.3
af-q8nhl6-f1 1 Q8NHL6 81.15 0.0 ILE A:142 A:142 61.0 0.349 E -93.5 124.2