Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55086276 . T A CCDS12900.1:NM_006866.2:c.431gTc>gAc_NP_006857.1:p.144V>D Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aee 4 A0A0G2JQ44 80.41 0.0 X-RAY
 2019-07-31 ASP G:122 G:123 29.0 0.193 E -100.9 157.0 29.0 0.193 0.0
ASP H:122 H:123 41.0 0.273 E -106.9 150.9 NA NA NA
2otp 1 Q8N149 99.49 6e-142 X-RAY
 2008-02-19 VAL A:121 A:121 63.0 0.406 E -116.6 170.4 43.0 0.277 0.129 B:Q8N149:0.129
VAL B:121 B:121 79.0 0.51 E -99.4 132.0 34.0 0.219 0.291 A:Q8N149:0.29
 HOH
 4.909
 O
 O
3d2u 3 Q8NHL6 80.81 2e-104 X-RAY
 2008-07-08 ASP C:123 D:123 55.0 0.367 E -114.0 136.0 55.0 0.367 0.0 HOH
 2.518
 OD2
 O
ASP F:123 H:123 55.0 0.367 E -107.8 135.9 NA NA NA
6k60 4 A0A0G2JQ44 81.12 3e-104 X-RAY
 2019-11-27 ASP D:124 D:123 67.0 0.447 B -93.4 138.1 67.0 0.447 0.0
ASP H:124 H:123 138.0 0.92 -143.8 105.3 NA NA NA
1ugn 1 Q8NHL6 80.3 8e-104 X-RAY
 2004-08-10 ASP A:123 A:123 55.0 0.367 E -114.2 135.4 55.0 0.367 0.0 HOH
 2.637
 O
 O
1g0x 1 Q8NHL6 80.71 1e-103 X-RAY
 2001-01-17 ASP A:122 A:123 27.0 0.18 E -112.5 134.9 27.0 0.18 0.0 HOH
 2.661
 OD1
 O
1p7q 4 Q8NHL6 80.71 1e-103 X-RAY
 2003-10-14 ASP D:122 D:123 53.0 0.353 E -98.0 150.1 53.0 0.353 0.0
1ufu 1 Q8NHL6 80.71 1e-103 X-RAY
 2004-08-10 ASP A:122 A:123 67.0 0.447 E -120.6 138.4 67.0 0.447 0.0
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 ASP A:123 A:123 39.0 0.26 E -108.1 131.9 39.0 0.26 0.0 HOH
 2.765
 OD2
 O
ASP B:123 B:123 48.0 0.32 E -113.0 142.2 48.0 0.32 0.0
4no0 4 Q8NHL6 80.51 5e-102 X-RAY
 2014-11-19 ASP D:120 D:123 42.0 0.28 E -118.2 113.0 42.0 0.28 0.0 HOH
 6.206
 OD2
 O
6ewa 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 ASP D:120 D:123 41.0 0.273 E -104.1 124.9 41.0 0.273 0.0 HOH
 4.323
 O
 O
ASP H:120 H:123 33.0 0.22 E -121.4 120.9 NA NA NA
6ewc 4 A0A0G2JQ44 80.51 5e-102 X-RAY
 2018-11-07 ASP D:120 D:123 40.0 0.267 E -116.1 126.8 40.0 0.267 0.0
ASP H:120 H:123 57.0 0.38 E -116.0 129.4 NA NA NA
6ewo 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 ASP D:120 D:123 34.0 0.227 E -114.6 121.6 34.0 0.227 0.0 HOH
 2.706
 OD2
 O
ASP H:120 H:123 33.0 0.22 E -116.9 128.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n149-f1 1 Q8N149 100.0 0.0 VAL A:144 A:144 27.0 0.174 E -132.1 139.2
af-q8n6c8-f1 1 Q8N6C8 81.84 0.0 ASP A:146 A:146 33.0 0.22 E -115.7 146.4
af-q8nhl6-f1 1 Q8NHL6 81.15 0.0 ASP A:146 A:146 28.0 0.187 E -111.9 143.7