Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 55086338 | . | C | A | CCDS12900.1:NM_006866.2:c.493Cgc>Agc_NP_006857.1:p.165R>S | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6aee | 4 | A0A0G2JQ44 | 80.41 | 0.0 |
X-RAY |
2019-07-31 | CYS | G:143 | G:144 | 50.0 | 0.37 | -155.3 | 157.1 | 50.0 | 0.37 | 0.0 | |||||||
CYS | H:143 | H:144 | 95.0 | 0.704 | 360.0 | 141.0 | NA | NA | NA | ||||||||||||||
2otp | 1 | Q8N149 | 99.49 | 6e-142 |
X-RAY |
2008-02-19 | CYS | A:142 | A:142 | 30.0 | 0.222 | E | -124.1 | 168.3 | 22.0 | 0.163 | 0.059 |
B:Q8N149:0.059 |
HOH |
5.367 |
O |
O |
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CYS | B:142 | B:142 | 27.0 | 0.2 | E | -115.2 | 136.0 | 12.0 | 0.089 | 0.111 |
A:Q8N149:0.111 |
HOH |
7.178 |
N |
O |
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3d2u | 3 | Q8NHL6 | 80.81 | 2e-104 |
X-RAY |
2008-07-08 | CYS | C:144 | D:144 | 55.0 | 0.407 | E | -107.3 | 151.3 | 55.0 | 0.407 | 0.0 |
HOH |
4.618 |
C |
O |
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CYS | F:144 | H:144 | 57.0 | 0.422 | E | -125.5 | 147.3 | NA | NA | NA | |||||||||||||
6k60 | 4 | A0A0G2JQ44 | 81.12 | 3e-104 |
X-RAY |
2019-11-27 | CYS | D:145 | D:144 | 49.0 | 0.363 | E | -100.3 | 172.7 | 49.0 | 0.363 | 0.0 | ||||||
CYS | H:145 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
1ugn | 1 | Q8NHL6 | 80.3 | 8e-104 |
X-RAY |
2004-08-10 | CYS | A:144 | A:144 | 47.0 | 0.348 | E | -128.0 | 161.0 | 47.0 | 0.348 | 0.0 |
HOH |
2.947 |
N |
O |
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1g0x | 1 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2001-01-17 | CYS | A:143 | A:144 | 45.0 | 0.333 | E | -105.1 | 129.5 | 45.0 | 0.333 | 0.0 |
HOH |
3.040 |
N |
O |
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1p7q | 4 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2003-10-14 | CYS | D:143 | D:144 | 73.0 | 0.541 | -108.8 | -153.1 | 73.0 | 0.541 | 0.0 | |||||||
1ufu | 1 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2004-08-10 | CYS | A:143 | A:144 | 91.0 | 0.674 | 360.0 | 152.7 | 91.0 | 0.674 | 0.0 | |||||||
1vdg | 1 | Q8NHL6 | 80.1 | 3e-102 |
X-RAY |
2005-08-02 | CYS | A:144 | A:144 | 27.0 | 0.2 | E | -106.8 | 159.7 | 16.0 | 0.119 | 0.081 |
B:Q8NHL6:0.081 |
HOH |
5.181 |
SG |
O |
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CYS | B:144 | B:144 | 39.0 | 0.289 | E | -139.0 | 152.2 | 22.0 | 0.163 | 0.126 |
A:Q8NHL6:0.126 |
HOH |
5.374 |
SG |
O |
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4no0 | 4 | Q8NHL6 | 80.51 | 5e-102 |
X-RAY |
2014-11-19 | CYS | D:141 | D:144 | 64.0 | 0.474 | E | -88.4 | 143.0 | 64.0 | 0.474 | 0.0 |
HOH |
8.430 |
SG |
O |
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6ewa | 4 | D9IDM8 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | CYS | D:141 | D:144 | 62.0 | 0.459 | E | -112.3 | 146.5 | 62.0 | 0.459 | 0.0 | ||||||
CYS | H:141 | H:144 | 41.0 | 0.304 | E | -112.4 | 137.4 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | CYS | D:141 | D:144 | 54.0 | 0.4 | E | -135.4 | 149.1 | 54.0 | 0.4 | 0.0 | ||||||
CYS | H:141 | H:144 | 52.0 | 0.385 | E | -131.8 | 147.3 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | CYS | D:141 | D:144 | 65.0 | 0.481 | E | -117.4 | 137.0 | 65.0 | 0.481 | 0.0 |
HOH |
4.614 |
O |
O |
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CYS | H:141 | H:144 | 40.0 | 0.296 | E | -123.7 | 127.4 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8n149-f1 | 1 | Q8N149 | 100.0 | 0.0 | ARG | A:165 | A:165 | 90.0 | 0.4 | E | -109.6 | 137.1 | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 81.84 | 0.0 | CYS | A:167 | A:167 | 45.0 | 0.333 | E | -105.1 | 133.2 | |
af-q8nhl6-f1 | 1 | Q8NHL6 | 81.15 | 0.0 | CYS | A:167 | A:167 | 45.0 | 0.333 | E | -101.2 | 132.9 |