Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 55086420 | . | C | A | CCDS12900.1:NM_006866.2:c.575tCg>tAg_NP_006857.1:p.192S>* | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6aee | 4 | A0A0G2JQ44 | 80.41 | 0.0 |
X-RAY |
2019-07-31 | TRP | G:170 | G:171 | 75.0 | 0.294 | E | -133.0 | 127.0 | 75.0 | 0.294 | 0.0 | ||||||
TRP | H:170 | H:171 | 116.0 | 0.455 | E | -109.0 | 155.0 | NA | NA | NA | |||||||||||||
2otp | 1 | Q8N149 | 99.49 | 6e-142 |
X-RAY |
2008-02-19 | SER | A:169 | A:169 | 44.0 | 0.383 | E | -137.2 | 142.8 | 1.0 | 0.009 | 0.374 |
B:Q8N149:0.374 |
HOH |
4.372 |
N |
O |
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SER | B:169 | B:169 | 76.0 | 0.661 | 172.8 | 136.1 | 30.0 | 0.261 | 0.4 |
A:Q8N149:0.4 |
HOH |
6.003 |
N |
O |
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3d2u | 3 | Q8NHL6 | 80.81 | 2e-104 |
X-RAY |
2008-07-08 | TRP | C:171 | D:171 | 66.0 | 0.259 | E | -107.7 | 130.8 | 66.0 | 0.259 | 0.0 |
HOH |
7.742 |
O |
O |
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TRP | F:171 | H:171 | 56.0 | 0.22 | E | -112.5 | 134.1 | NA | NA | NA | |||||||||||||
6k60 | 4 | A0A0G2JQ44 | 81.12 | 3e-104 |
X-RAY |
2019-11-27 | TRP | D:172 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
TRP | H:172 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
1ugn | 1 | Q8NHL6 | 80.3 | 8e-104 |
X-RAY |
2004-08-10 | TRP | A:171 | A:171 | 75.0 | 0.294 | E | -111.9 | 135.7 | 75.0 | 0.294 | 0.0 |
HOH |
4.145 |
CD1 |
O |
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1g0x | 1 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2001-01-17 | TRP | A:170 | A:171 | 67.0 | 0.263 | E | -103.9 | 130.8 | 67.0 | 0.263 | 0.0 |
HOH |
2.772 |
N |
O |
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1p7q | 4 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2003-10-14 | TRP | D:170 | D:171 | 81.0 | 0.318 | E | -116.1 | 142.1 | 81.0 | 0.318 | 0.0 | ||||||
1ufu | 1 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2004-08-10 | TRP | A:170 | A:171 | 114.0 | 0.447 | E | -79.9 | 130.2 | 114.0 | 0.447 | 0.0 | ||||||
1vdg | 1 | Q8NHL6 | 80.1 | 3e-102 |
X-RAY |
2005-08-02 | TRP | A:171 | A:171 | 111.0 | 0.435 | E | -109.1 | 127.0 | 111.0 | 0.435 | 0.0 |
HOH |
7.425 |
O |
O |
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TRP | B:171 | B:171 | 72.0 | 0.282 | E | -116.8 | 137.3 | 72.0 | 0.282 | 0.0 |
HOH |
8.161 |
O |
O |
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4no0 | 4 | Q8NHL6 | 80.51 | 5e-102 |
X-RAY |
2014-11-19 | TRP | D:168 | D:171 | 63.0 | 0.247 | E | -111.7 | 126.8 | 63.0 | 0.247 | 0.0 |
HOH |
3.115 |
NE1 |
O |
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6ewa | 4 | D9IDM8 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | TRP | D:168 | D:171 | 66.0 | 0.259 | E | -114.6 | 134.3 | 66.0 | 0.259 | 0.0 |
HOH |
8.901 |
CE3 |
O |
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TRP | H:168 | H:171 | 59.0 | 0.231 | E | -119.6 | 134.1 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | TRP | D:168 | D:171 | 60.0 | 0.235 | E | -118.8 | 141.9 | 60.0 | 0.235 | 0.0 | ||||||
TRP | H:168 | H:171 | 61.0 | 0.239 | E | -114.9 | 143.2 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | TRP | D:168 | D:171 | 68.0 | 0.267 | E | -119.7 | 128.7 | 68.0 | 0.267 | 0.0 |
HOH |
3.573 |
CH2 |
O |
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TRP | H:168 | H:171 | 58.0 | 0.227 | E | -118.4 | 135.2 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8n149-f1 | 1 | Q8N149 | 100.0 | 0.0 | SER | A:192 | A:192 | 2.0 | 0.017 | E | -116.5 | 124.0 | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 81.84 | 0.0 | SER | A:194 | A:194 | 7.0 | 0.061 | E | -130.0 | 135.3 | |
af-q8nhl6-f1 | 1 | Q8NHL6 | 81.15 | 0.0 | TRP | A:194 | A:194 | 35.0 | 0.137 | E | -107.4 | 136.4 |