Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55086463 . G A CCDS12900.1:NM_006866.2:c.618tgG>tgA_NP_006857.1:p.206W>* Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aee 4 A0A0G2JQ44 80.41 0.0 X-RAY
2019-07-31 TRP G:184 G:185 18.0 0.071 B -86.9 168.9 18.0 0.071 0.0
TRP H:184 H:185 13.0 0.051 -107.0 164.8 NA NA NA
2otp 1 Q8N149 99.49 6e-142 X-RAY
2008-02-19 TRP A:183 A:183 132.0 0.518 -122.2 169.5 19.0 0.075 0.443 B:Q8N149:0.443
HOH
6.461
CZ2
O
TRP B:183 B:183 148.0 0.58 -103.2 157.0 17.0 0.067 0.513 A:Q8N149:0.514
HOH
4.975
CH2
O
3d2u 3 Q8NHL6 80.81 2e-104 X-RAY
2008-07-08 TRP C:185 D:185 18.0 0.071 E -100.6 159.1 18.0 0.071 0.0 HOH
5.620
CH2
O
TRP F:185 H:185 17.0 0.067 E -103.7 162.1 NA NA NA
6k60 4 A0A0G2JQ44 81.12 3e-104 X-RAY
2019-11-27 TRP D:186 D:185 23.0 0.09 E -107.0 164.6 23.0 0.09 0.0
TRP H:186 H:185 69.0 0.271 E -118.6 164.7 NA NA NA
1ugn 1 Q8NHL6 80.3 8e-104 X-RAY
2004-08-10 TRP A:185 A:185 18.0 0.071 E -110.5 168.2 18.0 0.071 0.0 HOH
3.700
CZ2
O
1g0x 1 Q8NHL6 80.71 1e-103 X-RAY
2001-01-17 TRP A:184 A:185 18.0 0.071 E -110.1 165.8 18.0 0.071 0.0 HOH
3.589
NE1
O
1p7q 4 Q8NHL6 80.71 1e-103 X-RAY
2003-10-14 TRP D:184 D:185 30.0 0.118 E -111.3 164.0 30.0 0.118 0.0
1ufu 1 Q8NHL6 80.71 1e-103 X-RAY
2004-08-10 TRP A:184 A:185 22.0 0.086 E -102.4 171.2 22.0 0.086 0.0
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
2005-08-02 TRP A:185 A:185 8.0 0.031 E -101.8 161.5 8.0 0.031 0.0 HOH
3.950
CZ2
O
TRP B:185 B:185 9.0 0.035 B -96.1 165.7 9.0 0.035 0.0 HOH
3.304
NE1
O
4no0 4 Q8NHL6 80.51 5e-102 X-RAY
2014-11-19 TRP D:182 D:185 23.0 0.09 -93.8 164.7 23.0 0.09 0.0 HOH
4.845
N
O
6ewa 4 D9IDM8 80.51 5e-102 X-RAY
2018-11-07 TRP D:182 D:185 27.0 0.106 B -108.5 159.7 27.0 0.106 0.0 HOH
4.822
N
O
TRP H:182 H:185 19.0 0.075 E -101.4 165.0 NA NA NA
6ewc 4 A0A0G2JQ44 80.51 5e-102 X-RAY
2018-11-07 TRP D:182 D:185 20.0 0.078 B -107.0 159.4 20.0 0.078 0.0
TRP H:182 H:185 18.0 0.071 B -106.9 159.1 NA NA NA
6ewo 4 D9IDM8 80.51 5e-102 X-RAY
2018-11-07 TRP D:182 D:185 31.0 0.122 B -113.9 158.6 31.0 0.122 0.0 HOH
4.882
N
O
TRP H:182 H:185 21.0 0.082 E -104.9 160.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n149-f1 1 Q8N149 100.0 0.0 TRP A:206 A:206 2.0 0.008 E -113.2 161.3
af-q8n6c8-f1 1 Q8N6C8 81.84 0.0 TRP A:208 A:208 13.0 0.051 E -112.8 162.9
af-q8nhl6-f1 1 Q8NHL6 81.15 0.0 TRP A:208 A:208 8.0 0.031 E -112.2 161.0