Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 55086463 | . | G | A | CCDS12900.1:NM_006866.2:c.618tgG>tgA_NP_006857.1:p.206W>* | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6aee | 4 | A0A0G2JQ44 | 80.41 | 0.0 |
X-RAY |
2019-07-31 | TRP | G:184 | G:185 | 18.0 | 0.071 | B | -86.9 | 168.9 | 18.0 | 0.071 | 0.0 | ||||||
TRP | H:184 | H:185 | 13.0 | 0.051 | -107.0 | 164.8 | NA | NA | NA | ||||||||||||||
2otp | 1 | Q8N149 | 99.49 | 6e-142 |
X-RAY |
2008-02-19 | TRP | A:183 | A:183 | 132.0 | 0.518 | -122.2 | 169.5 | 19.0 | 0.075 | 0.443 |
B:Q8N149:0.443 |
HOH |
6.461 |
CZ2 |
O |
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TRP | B:183 | B:183 | 148.0 | 0.58 | -103.2 | 157.0 | 17.0 | 0.067 | 0.513 |
A:Q8N149:0.514 |
HOH |
4.975 |
CH2 |
O |
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3d2u | 3 | Q8NHL6 | 80.81 | 2e-104 |
X-RAY |
2008-07-08 | TRP | C:185 | D:185 | 18.0 | 0.071 | E | -100.6 | 159.1 | 18.0 | 0.071 | 0.0 |
HOH |
5.620 |
CH2 |
O |
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TRP | F:185 | H:185 | 17.0 | 0.067 | E | -103.7 | 162.1 | NA | NA | NA | |||||||||||||
6k60 | 4 | A0A0G2JQ44 | 81.12 | 3e-104 |
X-RAY |
2019-11-27 | TRP | D:186 | D:185 | 23.0 | 0.09 | E | -107.0 | 164.6 | 23.0 | 0.09 | 0.0 | ||||||
TRP | H:186 | H:185 | 69.0 | 0.271 | E | -118.6 | 164.7 | NA | NA | NA | |||||||||||||
1ugn | 1 | Q8NHL6 | 80.3 | 8e-104 |
X-RAY |
2004-08-10 | TRP | A:185 | A:185 | 18.0 | 0.071 | E | -110.5 | 168.2 | 18.0 | 0.071 | 0.0 |
HOH |
3.700 |
CZ2 |
O |
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1g0x | 1 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2001-01-17 | TRP | A:184 | A:185 | 18.0 | 0.071 | E | -110.1 | 165.8 | 18.0 | 0.071 | 0.0 |
HOH |
3.589 |
NE1 |
O |
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1p7q | 4 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2003-10-14 | TRP | D:184 | D:185 | 30.0 | 0.118 | E | -111.3 | 164.0 | 30.0 | 0.118 | 0.0 | ||||||
1ufu | 1 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2004-08-10 | TRP | A:184 | A:185 | 22.0 | 0.086 | E | -102.4 | 171.2 | 22.0 | 0.086 | 0.0 | ||||||
1vdg | 1 | Q8NHL6 | 80.1 | 3e-102 |
X-RAY |
2005-08-02 | TRP | A:185 | A:185 | 8.0 | 0.031 | E | -101.8 | 161.5 | 8.0 | 0.031 | 0.0 |
HOH |
3.950 |
CZ2 |
O |
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TRP | B:185 | B:185 | 9.0 | 0.035 | B | -96.1 | 165.7 | 9.0 | 0.035 | 0.0 |
HOH |
3.304 |
NE1 |
O |
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4no0 | 4 | Q8NHL6 | 80.51 | 5e-102 |
X-RAY |
2014-11-19 | TRP | D:182 | D:185 | 23.0 | 0.09 | -93.8 | 164.7 | 23.0 | 0.09 | 0.0 |
HOH |
4.845 |
N |
O |
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6ewa | 4 | D9IDM8 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | TRP | D:182 | D:185 | 27.0 | 0.106 | B | -108.5 | 159.7 | 27.0 | 0.106 | 0.0 |
HOH |
4.822 |
N |
O |
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TRP | H:182 | H:185 | 19.0 | 0.075 | E | -101.4 | 165.0 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | TRP | D:182 | D:185 | 20.0 | 0.078 | B | -107.0 | 159.4 | 20.0 | 0.078 | 0.0 | ||||||
TRP | H:182 | H:185 | 18.0 | 0.071 | B | -106.9 | 159.1 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | TRP | D:182 | D:185 | 31.0 | 0.122 | B | -113.9 | 158.6 | 31.0 | 0.122 | 0.0 |
HOH |
4.882 |
N |
O |
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TRP | H:182 | H:185 | 21.0 | 0.082 | E | -104.9 | 160.0 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8n149-f1 | 1 | Q8N149 | 100.0 | 0.0 | TRP | A:206 | A:206 | 2.0 | 0.008 | E | -113.2 | 161.3 | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 81.84 | 0.0 | TRP | A:208 | A:208 | 13.0 | 0.051 | E | -112.8 | 162.9 | |
af-q8nhl6-f1 | 1 | Q8NHL6 | 81.15 | 0.0 | TRP | A:208 | A:208 | 8.0 | 0.031 | E | -112.2 | 161.0 |