Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55106183 . G A CCDS12901.1:NM_006863.3:c.124Ggg>Agg_NP_006854.1:p.42G>R Homo sapiens leukocyte immunoglobulin like receptor A1 (LILRA1), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aee 4 A0A0G2JQ44 85.46 0.0 X-RAY
2019-07-31 GLY G:18 G:19 24.0 0.32 T 91.1 -25.0 24.0 0.32 0.0
GLY H:18 H:19 29.0 0.387 T 99.0 -26.9 NA NA NA
6zdx 2 A0A0G2JQ46 84.21 0.0 X-RAY
2020-07-22 GLY B:50 B:19 37.0 0.493 T 92.0 -37.7 37.0 0.493 0.0
6aed 1 Q8N423 84.63 0.0 X-RAY
2019-07-31 GLY A:19 A:19 37.0 0.493 T 84.9 -35.0 37.0 0.493 0.0
1ugn 1 Q8NHL6 88.89 7e-122 X-RAY
2004-08-10 GLY A:19 A:19 25.0 0.333 T 87.1 -15.4 25.0 0.333 0.0 HOH
2.865
O
O
3d2u 3 Q8NHL6 88.38 3e-121 X-RAY
2008-07-08 GLY C:19 D:19 28.0 0.373 T 91.3 -25.8 28.0 0.373 0.0 HOH
2.753
O
O
GLY F:19 H:19 42.0 0.56 T 87.0 -7.4 NA NA NA
1g0x 1 Q8NHL6 88.78 1e-120 X-RAY
2001-01-17 GLY A:18 A:19 35.0 0.467 T 92.2 -14.7 35.0 0.467 0.0 HOH
2.654
O
O
1p7q 4 Q8NHL6 88.78 1e-120 X-RAY
2003-10-14 GLY D:18 D:19 38.0 0.507 T 99.9 -35.2 33.0 0.44 0.067 B:P61769:0.067
1ufu 1 Q8NHL6 88.78 1e-120 X-RAY
2004-08-10 GLY A:18 A:19 32.0 0.427 T 87.1 -3.1 32.0 0.427 0.0
6k60 4 A0A0G2JQ44 88.32 1e-120 X-RAY
2019-11-27 GLY D:20 D:19 48.0 0.64 T 82.8 5.2 44.0 0.587 0.053 B:P61769:0.053
GLY H:20 H:19 38.0 0.507 T 133.2 -15.9 NA NA NA
4no0 4 Q8NHL6 88.72 4e-120 X-RAY
2014-11-19 GLY D:16 D:19 50.0 0.667 T 90.2 -2.6 50.0 0.667 0.0 HOH
5.172
CA
O
6ewa 4 D9IDM8 88.72 4e-120 X-RAY
2018-11-07 GLY D:16 D:19 56.0 0.747 T 92.4 -10.4 56.0 0.747 0.0
GLY H:16 H:19 36.0 0.48 T 96.7 -17.9 NA NA NA
6ewc 4 A0A0G2JQ44 88.72 4e-120 X-RAY
2018-11-07 GLY D:16 D:19 40.0 0.533 T 102.1 -36.0 40.0 0.533 0.0
GLY H:16 H:19 40.0 0.533 T 100.9 -35.7 NA NA NA
6ewo 4 D9IDM8 88.72 4e-120 X-RAY
2018-11-07 GLY D:16 D:19 52.0 0.693 T 85.3 6.4 47.0 0.627 0.066 B:P61769:0.067
HOH
6.486
N
O
GLY H:16 H:19 44.0 0.587 T 84.4 0.5 NA NA NA
5knm 3 Q8NHL6 86.87 3e-118 X-RAY
2017-06-14 GLY C:88 D:19 46.0 0.613 T 68.0 7.9 46.0 0.613 0.0
1vdg 1 Q8NHL6 86.8 2e-117 X-RAY
2005-08-02 GLY A:19 A:19 31.0 0.413 T 88.2 -27.9 31.0 0.413 0.0
GLY B:19 B:19 34.0 0.453 T 99.7 -24.5 34.0 0.453 0.0 HOH
3.398
C
O
2gw5 1 Q8N423 80.81 2e-105 X-RAY
2006-06-20 GLY A:19 A:19 34.0 0.453 T 46.4 0.6 34.0 0.453 0.0 HOH
2.613
O
O
6bcs 1 A0A0G2JNQ7 80.81 2e-105 X-RAY
2018-09-05 GLY A:20 A:19 39.0 0.52 T 89.1 -10.4 39.0 0.52 0.0 CL
DMS
HOH
6.190
9.186
3.257
N
N
C
CL
C2
O
2dyp 4 Q8N423 81.12 3e-105 X-RAY
2006-11-07 GLY D:19 D:19 33.0 0.44 T 106.5 -33.1 31.0 0.413 0.027 B:P61769:0.027
HOH
3.427
N
O
2otp 1 Q8N149 80.3 1e-104 X-RAY
2008-02-19 GLY A:19 A:19 45.0 0.6 S 87.0 37.9 45.0 0.6 0.0 HOH
8.265
O
O
GLY B:19 B:19 71.0 0.947 T 85.1 1.8 71.0 0.947 0.0 HOH
2.569
O
O
3q2c 1 Q8N6C8 86.6 1e-50 X-RAY
2011-07-13 GLY A:19 A:19 42.0 0.56 T 88.4 -23.1 42.0 0.56 0.0 HOH
7.512
N
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o75019-f1 1 O75019 100.0 0.0 GLY A:42 A:42 40.0 0.533 T 88.5 -13.9
af-q8n6c8-f1 1 Q8N6C8 85.39 0.0 GLY A:42 A:42 40.0 0.533 T 85.1 -10.2
af-q8n423-f1 1 Q8N423 84.62 0.0 GLY A:42 A:42 39.0 0.52 T 84.9 -14.4
af-q8nhl6-f1 1 Q8NHL6 84.73 0.0 GLY A:42 A:42 38.0 0.507 T 91.2 -21.8