Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55106319 . C A CCDS12901.1:NM_006863.3:c.260tCc>tAc_NP_006854.1:p.87S>Y Homo sapiens leukocyte immunoglobulin like receptor A1 (LILRA1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aee 4 A0A0G2JQ44 85.46 0.0 X-RAY
 2019-07-31 SER G:63 G:64 67.0 0.583 S -153.0 115.0 67.0 0.583 0.0
SER H:63 H:64 74.0 0.643 S -131.2 101.0 NA NA NA
6zdx 2 A0A0G2JQ46 84.21 0.0 X-RAY
 2020-07-22 SER B:95 B:64 61.0 0.53 S -132.5 117.1 61.0 0.53 0.0
6aed 1 Q8N423 84.63 0.0 X-RAY
 2019-07-31 SER A:64 A:64 69.0 0.6 S -121.2 101.0 69.0 0.6 0.0
1ugn 1 Q8NHL6 88.89 7e-122 X-RAY
 2004-08-10 SER A:64 A:64 62.0 0.539 S -149.1 101.1 62.0 0.539 0.0 HOH
 2.723
 OG
 O
3d2u 3 Q8NHL6 88.38 3e-121 X-RAY
 2008-07-08 SER C:64 D:64 63.0 0.548 S -150.3 106.8 63.0 0.548 0.0 HOH
 2.748
 O
 O
SER F:64 H:64 63.0 0.548 S -153.7 107.0 NA NA NA
1g0x 1 Q8NHL6 88.78 1e-120 X-RAY
 2001-01-17 SER A:63 A:64 65.0 0.565 S -148.8 104.4 65.0 0.565 0.0 HOH
 2.689
 O
 O
1p7q 4 Q8NHL6 88.78 1e-120 X-RAY
 2003-10-14 SER D:63 D:64 66.0 0.574 S -95.0 94.7 66.0 0.574 0.0
1ufu 1 Q8NHL6 88.78 1e-120 X-RAY
 2004-08-10 SER A:63 A:64 66.0 0.574 S -154.6 102.0 66.0 0.574 0.0
6k60 4 A0A0G2JQ44 88.32 1e-120 X-RAY
 2019-11-27 SER D:65 D:64 61.0 0.53 S -138.3 115.2 61.0 0.53 0.0
SER H:65 H:64 62.0 0.539 S -169.7 93.7 NA NA NA
4no0 4 Q8NHL6 88.72 4e-120 X-RAY
 2014-11-19 SER D:61 D:64 58.0 0.504 S -148.3 114.1 58.0 0.504 0.0 HOH
 8.909
 CB
 O
6ewa 4 D9IDM8 88.72 4e-120 X-RAY
 2018-11-07 SER D:61 D:64 59.0 0.513 S -134.5 114.4 59.0 0.513 0.0
SER H:61 H:64 65.0 0.565 S -143.2 105.5 NA NA NA
6ewc 4 A0A0G2JQ44 88.72 4e-120 X-RAY
 2018-11-07 SER D:61 D:64 63.0 0.548 S -137.3 116.0 63.0 0.548 0.0
SER H:61 H:64 64.0 0.557 S -137.5 116.7 NA NA NA
6ewo 4 D9IDM8 88.72 4e-120 X-RAY
 2018-11-07 SER D:61 D:64 63.0 0.548 S -140.5 113.6 63.0 0.548 0.0 HOH
 2.864
 N
 O
SER H:61 H:64 62.0 0.539 S -146.5 104.0 NA NA NA
5knm 3 Q8NHL6 86.87 3e-118 X-RAY
 2017-06-14 SER C:133 D:64 54.0 0.47 S 52.9 -140.4 54.0 0.47 0.0
1vdg 1 Q8NHL6 86.8 2e-117 X-RAY
 2005-08-02 SER A:64 A:64 67.0 0.583 S -143.6 95.8 67.0 0.583 0.0 HOH
 9.636
 O
 O
SER B:64 B:64 67.0 0.583 S -135.2 105.6 67.0 0.583 0.0 HOH
 6.306
 N
 O
2gw5 1 Q8N423 80.81 2e-105 X-RAY
 2006-06-20 SER A:64 A:64 67.0 0.583 S -146.6 111.1 67.0 0.583 0.0 HOH
 2.670
 O
 O
6bcs 1 A0A0G2JNQ7 80.81 2e-105 X-RAY
 2018-09-05 SER A:65 A:64 65.0 0.565 S -145.5 113.5 65.0 0.565 0.0 CL
HOH
 7.523
2.612
 O
O
 CL
O
2dyp 4 Q8N423 81.12 3e-105 X-RAY
 2006-11-07 SER D:64 D:64 59.0 0.513 S -139.0 112.6 59.0 0.513 0.0 HOH
 3.471
 OG
 O
2otp 1 Q8N149 80.3 1e-104 X-RAY
 2008-02-19 SER A:63 A:63 83.0 0.722 S -96.6 127.0 83.0 0.722 0.0 HOH
 5.922
 O
 O
SER B:63 B:63 95.0 0.826 S -84.2 94.9 95.0 0.826 0.0 HOH
 8.360
 CA
 O
3q2c 1 Q8N6C8 86.6 1e-50 X-RAY
 2011-07-13 SER A:64 A:64 73.0 0.635 S -135.0 94.6 73.0 0.635 0.0 HOH
 4.486
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o75019-f1 1 O75019 100.0 0.0 SER A:87 A:87 62.0 0.539 S -145.0 101.7
af-q8n6c8-f1 1 Q8N6C8 85.39 0.0 SER A:87 A:87 66.0 0.574 S -144.5 99.3
af-q8n423-f1 1 Q8N423 84.62 0.0 SER A:87 A:87 57.0 0.496 S -147.3 103.7
af-q8nhl6-f1 1 Q8NHL6 84.73 0.0 SER A:87 A:87 66.0 0.574 S -144.2 107.1