Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 55106616 | . | C | A | CCDS12901.1:NM_006863.3:c.410tCa>tAa_NP_006854.1:p.137S>* | Homo sapiens leukocyte immunoglobulin like receptor A1 (LILRA1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6aee | 4 | A0A0G2JQ44 | 85.46 | 0.0 |
X-RAY |
2019-07-31 | SER | G:113 | G:114 | 81.0 | 0.704 | S | -171.6 | 148.8 | 81.0 | 0.704 | 0.0 | ||||||
SER | H:113 | H:114 | 94.0 | 0.817 | T | -63.0 | 146.9 | NA | NA | NA | |||||||||||||
6zdx | 2 | A0A0G2JQ46 | 84.21 | 0.0 |
X-RAY |
2020-07-22 | SER | B:145 | B:114 | 56.0 | 0.487 | T | -58.1 | 131.1 | 56.0 | 0.487 | 0.0 | ||||||
6aed | 1 | Q8N423 | 84.63 | 0.0 |
X-RAY |
2019-07-31 | SER | A:113 | A:114 | 66.0 | 0.574 | T | -67.0 | 119.0 | 66.0 | 0.574 | 0.0 | ||||||
1ugn | 1 | Q8NHL6 | 88.89 | 7e-122 |
X-RAY |
2004-08-10 | SER | A:114 | A:114 | 66.0 | 0.574 | T | -56.4 | 137.3 | 66.0 | 0.574 | 0.0 |
HOH |
2.675 |
O |
O |
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3d2u | 3 | Q8NHL6 | 88.38 | 3e-121 |
X-RAY |
2008-07-08 | SER | C:114 | D:114 | 64.0 | 0.557 | T | -75.5 | 150.4 | 64.0 | 0.557 | 0.0 |
HOH |
4.731 |
OG |
O |
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SER | F:114 | H:114 | 58.0 | 0.504 | T | -60.1 | 136.8 | NA | NA | NA | |||||||||||||
1g0x | 1 | Q8NHL6 | 88.78 | 1e-120 |
X-RAY |
2001-01-17 | SER | A:113 | A:114 | 68.0 | 0.591 | T | -59.6 | 144.3 | 68.0 | 0.591 | 0.0 |
HOH |
5.073 |
O |
O |
||
1p7q | 4 | Q8NHL6 | 88.78 | 1e-120 |
X-RAY |
2003-10-14 | SER | D:113 | D:114 | 53.0 | 0.461 | S | -45.6 | 111.2 | 53.0 | 0.461 | 0.0 | ||||||
1ufu | 1 | Q8NHL6 | 88.78 | 1e-120 |
X-RAY |
2004-08-10 | SER | A:113 | A:114 | 106.0 | 0.922 | T | -51.9 | 160.6 | 106.0 | 0.922 | 0.0 | ||||||
6k60 | 4 | A0A0G2JQ44 | 88.32 | 1e-120 |
X-RAY |
2019-11-27 | SER | D:115 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
SER | H:115 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
4no0 | 4 | Q8NHL6 | 88.72 | 4e-120 |
X-RAY |
2014-11-19 | SER | D:111 | D:114 | 61.0 | 0.53 | T | -48.9 | 141.1 | 61.0 | 0.53 | 0.0 |
HOH |
3.106 |
OG |
O |
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6ewa | 4 | D9IDM8 | 88.72 | 4e-120 |
X-RAY |
2018-11-07 | SER | D:111 | D:114 | 57.0 | 0.496 | T | -46.3 | 137.9 | 57.0 | 0.496 | 0.0 |
HOH |
5.420 |
OG |
O |
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SER | H:111 | H:114 | 53.0 | 0.461 | T | -50.8 | 141.3 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 88.72 | 4e-120 |
X-RAY |
2018-11-07 | SER | D:111 | D:114 | 55.0 | 0.478 | T | -53.3 | 122.3 | 55.0 | 0.478 | 0.0 | ||||||
SER | H:111 | H:114 | 52.0 | 0.452 | T | -53.5 | 124.5 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 88.72 | 4e-120 |
X-RAY |
2018-11-07 | SER | D:111 | D:114 | 61.0 | 0.53 | T | -44.8 | 134.3 | 61.0 | 0.53 | 0.0 |
HOH |
9.400 |
N |
O |
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SER | H:111 | H:114 | 61.0 | 0.53 | T | -52.6 | 136.4 | NA | NA | NA | |||||||||||||
5knm | 3 | Q8NHL6 | 86.87 | 3e-118 |
X-RAY |
2017-06-14 | SER | C:183 | D:114 | 42.0 | 0.365 | S | 70.0 | -4.6 | 42.0 | 0.365 | 0.0 | ||||||
1vdg | 1 | Q8NHL6 | 86.8 | 2e-117 |
X-RAY |
2005-08-02 | SER | A:114 | A:114 | 68.0 | 0.591 | T | -49.0 | 127.9 | 68.0 | 0.591 | 0.0 |
HOH |
5.869 |
N |
O |
||
SER | B:114 | B:114 | 63.0 | 0.548 | T | -50.0 | 144.5 | 63.0 | 0.548 | 0.0 |
HOH |
6.555 |
O |
O |
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2gw5 | 1 | Q8N423 | 80.81 | 2e-105 |
X-RAY |
2006-06-20 | SER | A:113 | A:114 | 63.0 | 0.548 | T | -55.4 | 128.8 | 63.0 | 0.548 | 0.0 |
HOH |
2.811 |
OG |
O |
||
6bcs | 1 | A0A0G2JNQ7 | 80.81 | 2e-105 |
X-RAY |
2018-09-05 | SER | A:114 | A:114 | 60.0 | 0.522 | T | -61.1 | 132.0 | 60.0 | 0.522 | 0.0 |
HOH |
6.258 |
N |
O |
||
2dyp | 4 | Q8N423 | 81.12 | 3e-105 |
X-RAY |
2006-11-07 | SER | D:113 | D:113 | 61.0 | 0.53 | T | -47.9 | 149.8 | 61.0 | 0.53 | 0.0 | ||||||
2otp | 1 | Q8N149 | 80.3 | 1e-104 |
X-RAY |
2008-02-19 | LEU | A:112 | A:112 | 187.0 | 1.0 | T | -66.3 | 108.6 | 116.0 | 0.682 | 0.318 |
B:Q8N149:0.418 |
HOH |
3.242 |
CD2 |
O |
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LEU | B:112 | B:112 | 191.0 | 1.0 | T | -60.0 | 86.7 | 83.0 | 0.488 | 0.512 |
A:Q8N149:0.635 |
HOH |
4.629 |
O |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-o75019-f1 | 1 | O75019 | 100.0 | 0.0 | SER | A:137 | A:137 | 64.0 | 0.557 | T | -48.1 | 133.2 | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 85.39 | 0.0 | SER | A:137 | A:137 | 74.0 | 0.643 | T | -54.4 | 133.6 | |
af-q8n423-f1 | 1 | Q8N423 | 84.62 | 0.0 | SER | A:136 | A:136 | 71.0 | 0.617 | T | -49.8 | 136.3 | |
af-q8nhl6-f1 | 1 | Q8NHL6 | 84.73 | 0.0 | SER | A:137 | A:137 | 62.0 | 0.539 | T | -50.9 | 132.3 |