Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 55106621 | . | G | A | CCDS12901.1:NM_006863.3:c.415Ggg>Agg_NP_006854.1:p.139G>R | Homo sapiens leukocyte immunoglobulin like receptor A1 (LILRA1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6aee | 4 | A0A0G2JQ44 | 85.46 | 0.0 |
X-RAY |
2019-07-31 | GLY | G:115 | G:116 | 39.0 | 0.52 | -107.2 | -171.0 | 39.0 | 0.52 | 0.0 | |||||||
GLY | H:115 | H:116 | 49.0 | 0.653 | S | -117.1 | -179.1 | NA | NA | NA | |||||||||||||
6zdx | 2 | A0A0G2JQ46 | 84.21 | 0.0 |
X-RAY |
2020-07-22 | GLY | B:147 | B:116 | 24.0 | 0.32 | -79.6 | 171.7 | 24.0 | 0.32 | 0.0 | |||||||
6aed | 1 | Q8N423 | 84.63 | 0.0 |
X-RAY |
2019-07-31 | GLY | A:115 | A:116 | 24.0 | 0.32 | -101.0 | 147.0 | 24.0 | 0.32 | 0.0 | |||||||
1ugn | 1 | Q8NHL6 | 88.89 | 7e-122 |
X-RAY |
2004-08-10 | GLY | A:116 | A:116 | 25.0 | 0.333 | -84.0 | 161.8 | 25.0 | 0.333 | 0.0 |
HOH |
3.635 |
N |
O |
|||
3d2u | 3 | Q8NHL6 | 88.38 | 3e-121 |
X-RAY |
2008-07-08 | GLY | C:116 | D:116 | 21.0 | 0.28 | -76.0 | 147.5 | 21.0 | 0.28 | 0.0 | |||||||
GLY | F:116 | H:116 | 18.0 | 0.24 | -84.7 | 166.2 | NA | NA | NA | ||||||||||||||
1g0x | 1 | Q8NHL6 | 88.78 | 1e-120 |
X-RAY |
2001-01-17 | GLY | A:115 | A:116 | 26.0 | 0.347 | -91.3 | 171.4 | 26.0 | 0.347 | 0.0 |
HOH |
5.001 |
CA |
O |
|||
1p7q | 4 | Q8NHL6 | 88.78 | 1e-120 |
X-RAY |
2003-10-14 | GLY | D:115 | D:116 | 21.0 | 0.28 | -179.9 | 141.7 | 21.0 | 0.28 | 0.0 | |||||||
1ufu | 1 | Q8NHL6 | 88.78 | 1e-120 |
X-RAY |
2004-08-10 | GLY | A:115 | A:116 | 26.0 | 0.347 | -98.6 | -170.0 | 26.0 | 0.347 | 0.0 | |||||||
6k60 | 4 | A0A0G2JQ44 | 88.32 | 1e-120 |
X-RAY |
2019-11-27 | GLY | D:117 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
GLY | H:117 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
4no0 | 4 | Q8NHL6 | 88.72 | 4e-120 |
X-RAY |
2014-11-19 | GLY | D:113 | D:116 | 27.0 | 0.36 | -97.9 | 172.4 | 27.0 | 0.36 | 0.0 |
HOH |
5.557 |
N |
O |
|||
6ewa | 4 | D9IDM8 | 88.72 | 4e-120 |
X-RAY |
2018-11-07 | GLY | D:113 | D:116 | 23.0 | 0.307 | -86.8 | 161.1 | 23.0 | 0.307 | 0.0 |
HOH |
5.955 |
N |
O |
|||
GLY | H:113 | H:116 | 21.0 | 0.28 | -79.5 | 167.7 | NA | NA | NA | ||||||||||||||
6ewc | 4 | A0A0G2JQ44 | 88.72 | 4e-120 |
X-RAY |
2018-11-07 | GLY | D:113 | D:116 | 28.0 | 0.373 | -75.6 | 171.7 | 28.0 | 0.373 | 0.0 | |||||||
GLY | H:113 | H:116 | 27.0 | 0.36 | -78.2 | 174.2 | NA | NA | NA | ||||||||||||||
6ewo | 4 | D9IDM8 | 88.72 | 4e-120 |
X-RAY |
2018-11-07 | GLY | D:113 | D:116 | 23.0 | 0.307 | -79.3 | 163.9 | 23.0 | 0.307 | 0.0 |
HOH |
6.965 |
C |
O |
|||
GLY | H:113 | H:116 | 19.0 | 0.253 | -81.1 | 164.3 | NA | NA | NA | ||||||||||||||
5knm | 3 | Q8NHL6 | 86.87 | 3e-118 |
X-RAY |
2017-06-14 | GLY | C:185 | D:116 | 60.0 | 0.8 | S | -90.7 | 27.9 | 60.0 | 0.8 | 0.0 | ||||||
1vdg | 1 | Q8NHL6 | 86.8 | 2e-117 |
X-RAY |
2005-08-02 | GLY | A:116 | A:116 | 25.0 | 0.333 | -90.9 | -177.1 | 25.0 | 0.333 | 0.0 |
HOH |
5.222 |
CA |
O |
|||
GLY | B:116 | B:116 | 21.0 | 0.28 | -81.9 | 168.8 | 21.0 | 0.28 | 0.0 |
HOH |
3.483 |
CA |
O |
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2gw5 | 1 | Q8N423 | 80.81 | 2e-105 |
X-RAY |
2006-06-20 | GLY | A:115 | A:116 | 17.0 | 0.227 | -86.9 | -177.6 | 17.0 | 0.227 | 0.0 |
HOH |
3.617 |
CA |
O |
|||
6bcs | 1 | A0A0G2JNQ7 | 80.81 | 2e-105 |
X-RAY |
2018-09-05 | GLY | A:116 | A:116 | 21.0 | 0.28 | -67.8 | 153.6 | 21.0 | 0.28 | 0.0 |
HOH |
5.669 |
CA |
O |
|||
2dyp | 4 | Q8N423 | 81.12 | 3e-105 |
X-RAY |
2006-11-07 | GLY | D:115 | D:115 | 19.0 | 0.253 | E | -91.0 | -153.6 | 19.0 | 0.253 | 0.0 | ||||||
2otp | 1 | Q8N149 | 80.3 | 1e-104 |
X-RAY |
2008-02-19 | GLY | A:114 | A:114 | 33.0 | 0.44 | -89.1 | -173.3 | 10.0 | 0.133 | 0.307 |
B:Q8N149:0.307 |
HOH |
4.665 |
CA |
O |
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GLY | B:114 | B:114 | 25.0 | 0.333 | -101.9 | 151.1 | 4.0 | 0.053 | 0.28 |
A:Q8N149:0.28 |
HOH |
3.235 |
CA |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-o75019-f1 | 1 | O75019 | 100.0 | 0.0 | GLY | A:139 | A:139 | 17.0 | 0.227 | -75.3 | 163.3 | ||
af-q8n6c8-f1 | 1 | Q8N6C8 | 85.39 | 0.0 | GLY | A:139 | A:139 | 17.0 | 0.227 | -77.3 | 163.5 | ||
af-q8n423-f1 | 1 | Q8N423 | 84.62 | 0.0 | GLY | A:138 | A:138 | 17.0 | 0.227 | -73.0 | 166.6 | ||
af-q8nhl6-f1 | 1 | Q8NHL6 | 84.73 | 0.0 | GLY | A:139 | A:139 | 22.0 | 0.293 | -79.0 | 167.6 |