Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55106621 . G A CCDS12901.1:NM_006863.3:c.415Ggg>Agg_NP_006854.1:p.139G>R Homo sapiens leukocyte immunoglobulin like receptor A1 (LILRA1), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aee 4 A0A0G2JQ44 85.46 0.0 X-RAY
2019-07-31 GLY G:115 G:116 39.0 0.52 -107.2 -171.0 39.0 0.52 0.0
GLY H:115 H:116 49.0 0.653 S -117.1 -179.1 NA NA NA
6zdx 2 A0A0G2JQ46 84.21 0.0 X-RAY
2020-07-22 GLY B:147 B:116 24.0 0.32 -79.6 171.7 24.0 0.32 0.0
6aed 1 Q8N423 84.63 0.0 X-RAY
2019-07-31 GLY A:115 A:116 24.0 0.32 -101.0 147.0 24.0 0.32 0.0
1ugn 1 Q8NHL6 88.89 7e-122 X-RAY
2004-08-10 GLY A:116 A:116 25.0 0.333 -84.0 161.8 25.0 0.333 0.0 HOH
3.635
N
O
3d2u 3 Q8NHL6 88.38 3e-121 X-RAY
2008-07-08 GLY C:116 D:116 21.0 0.28 -76.0 147.5 21.0 0.28 0.0
GLY F:116 H:116 18.0 0.24 -84.7 166.2 NA NA NA
1g0x 1 Q8NHL6 88.78 1e-120 X-RAY
2001-01-17 GLY A:115 A:116 26.0 0.347 -91.3 171.4 26.0 0.347 0.0 HOH
5.001
CA
O
1p7q 4 Q8NHL6 88.78 1e-120 X-RAY
2003-10-14 GLY D:115 D:116 21.0 0.28 -179.9 141.7 21.0 0.28 0.0
1ufu 1 Q8NHL6 88.78 1e-120 X-RAY
2004-08-10 GLY A:115 A:116 26.0 0.347 -98.6 -170.0 26.0 0.347 0.0
6k60 4 A0A0G2JQ44 88.32 1e-120 X-RAY
2019-11-27 GLY D:117 NA:NA DO NA DO DO DO NA NA NA
GLY H:117 NA:NA DO NA DO DO DO NA NA NA
4no0 4 Q8NHL6 88.72 4e-120 X-RAY
2014-11-19 GLY D:113 D:116 27.0 0.36 -97.9 172.4 27.0 0.36 0.0 HOH
5.557
N
O
6ewa 4 D9IDM8 88.72 4e-120 X-RAY
2018-11-07 GLY D:113 D:116 23.0 0.307 -86.8 161.1 23.0 0.307 0.0 HOH
5.955
N
O
GLY H:113 H:116 21.0 0.28 -79.5 167.7 NA NA NA
6ewc 4 A0A0G2JQ44 88.72 4e-120 X-RAY
2018-11-07 GLY D:113 D:116 28.0 0.373 -75.6 171.7 28.0 0.373 0.0
GLY H:113 H:116 27.0 0.36 -78.2 174.2 NA NA NA
6ewo 4 D9IDM8 88.72 4e-120 X-RAY
2018-11-07 GLY D:113 D:116 23.0 0.307 -79.3 163.9 23.0 0.307 0.0 HOH
6.965
C
O
GLY H:113 H:116 19.0 0.253 -81.1 164.3 NA NA NA
5knm 3 Q8NHL6 86.87 3e-118 X-RAY
2017-06-14 GLY C:185 D:116 60.0 0.8 S -90.7 27.9 60.0 0.8 0.0
1vdg 1 Q8NHL6 86.8 2e-117 X-RAY
2005-08-02 GLY A:116 A:116 25.0 0.333 -90.9 -177.1 25.0 0.333 0.0 HOH
5.222
CA
O
GLY B:116 B:116 21.0 0.28 -81.9 168.8 21.0 0.28 0.0 HOH
3.483
CA
O
2gw5 1 Q8N423 80.81 2e-105 X-RAY
2006-06-20 GLY A:115 A:116 17.0 0.227 -86.9 -177.6 17.0 0.227 0.0 HOH
3.617
CA
O
6bcs 1 A0A0G2JNQ7 80.81 2e-105 X-RAY
2018-09-05 GLY A:116 A:116 21.0 0.28 -67.8 153.6 21.0 0.28 0.0 HOH
5.669
CA
O
2dyp 4 Q8N423 81.12 3e-105 X-RAY
2006-11-07 GLY D:115 D:115 19.0 0.253 E -91.0 -153.6 19.0 0.253 0.0
2otp 1 Q8N149 80.3 1e-104 X-RAY
2008-02-19 GLY A:114 A:114 33.0 0.44 -89.1 -173.3 10.0 0.133 0.307 B:Q8N149:0.307
HOH
4.665
CA
O
GLY B:114 B:114 25.0 0.333 -101.9 151.1 4.0 0.053 0.28 A:Q8N149:0.28
HOH
3.235
CA
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o75019-f1 1 O75019 100.0 0.0 GLY A:139 A:139 17.0 0.227 -75.3 163.3
af-q8n6c8-f1 1 Q8N6C8 85.39 0.0 GLY A:139 A:139 17.0 0.227 -77.3 163.5
af-q8n423-f1 1 Q8N423 84.62 0.0 GLY A:138 A:138 17.0 0.227 -73.0 166.6
af-q8nhl6-f1 1 Q8NHL6 84.73 0.0 GLY A:139 A:139 22.0 0.293 -79.0 167.6