Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 55106663 | . | A | C | CCDS12901.1:NM_006863.3:c.457Agc>Cgc_NP_006854.1:p.153S>R | Homo sapiens leukocyte immunoglobulin like receptor A1 (LILRA1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6aee | 4 | A0A0G2JQ44 | 85.46 | 0.0 |
X-RAY |
2019-07-31 | GLY | G:129 | G:130 | 0.0 | 0.0 | E | -157.1 | 133.0 | 0.0 | 0.0 | 0.0 | ||||||
GLY | H:129 | H:130 | 1.0 | 0.013 | E | -151.0 | 131.0 | NA | NA | NA | |||||||||||||
6zdx | 2 | A0A0G2JQ46 | 84.21 | 0.0 |
X-RAY |
2020-07-22 | GLY | B:161 | B:130 | 1.0 | 0.013 | E | -142.3 | 137.5 | 1.0 | 0.013 | 0.0 | ||||||
6aed | 1 | Q8N423 | 84.63 | 0.0 |
X-RAY |
2019-07-31 | GLY | A:129 | A:130 | 3.0 | 0.04 | E | -157.0 | 165.0 | 3.0 | 0.04 | 0.0 | ||||||
1ugn | 1 | Q8NHL6 | 88.89 | 7e-122 |
X-RAY |
2004-08-10 | GLY | A:130 | A:130 | 0.0 | 0.0 | E | -152.3 | 146.4 | 0.0 | 0.0 | 0.0 |
HOH |
4.791 |
CA |
O |
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3d2u | 3 | Q8NHL6 | 88.38 | 3e-121 |
X-RAY |
2008-07-08 | GLY | C:130 | D:130 | 1.0 | 0.013 | E | -122.3 | 140.5 | 1.0 | 0.013 | 0.0 |
HOH |
5.544 |
N |
O |
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GLY | F:130 | H:130 | 2.0 | 0.027 | E | -116.1 | 138.7 | NA | NA | NA | |||||||||||||
1g0x | 1 | Q8NHL6 | 88.78 | 1e-120 |
X-RAY |
2001-01-17 | GLY | A:129 | A:130 | 1.0 | 0.013 | E | -137.0 | 134.0 | 1.0 | 0.013 | 0.0 |
HOH |
3.709 |
CA |
O |
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1p7q | 4 | Q8NHL6 | 88.78 | 1e-120 |
X-RAY |
2003-10-14 | GLY | D:129 | D:130 | 2.0 | 0.027 | E | -158.5 | 139.0 | 2.0 | 0.027 | 0.0 | ||||||
1ufu | 1 | Q8NHL6 | 88.78 | 1e-120 |
X-RAY |
2004-08-10 | GLY | A:129 | A:130 | 2.0 | 0.027 | -171.1 | 131.5 | 2.0 | 0.027 | 0.0 | |||||||
6k60 | 4 | A0A0G2JQ44 | 88.32 | 1e-120 |
X-RAY |
2019-11-27 | GLY | D:131 | D:130 | 0.0 | 0.0 | -174.4 | 122.3 | 0.0 | 0.0 | 0.0 | |||||||
GLY | H:131 | H:130 | 6.0 | 0.08 | B | -137.2 | 127.7 | NA | NA | NA | |||||||||||||
4no0 | 4 | Q8NHL6 | 88.72 | 4e-120 |
X-RAY |
2014-11-19 | GLY | D:127 | D:130 | 0.0 | 0.0 | E | -127.9 | 130.4 | 0.0 | 0.0 | 0.0 |
HOH |
4.252 |
CA |
O |
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6ewa | 4 | D9IDM8 | 88.72 | 4e-120 |
X-RAY |
2018-11-07 | GLY | D:127 | D:130 | 1.0 | 0.013 | E | -118.9 | 133.8 | 1.0 | 0.013 | 0.0 |
HOH |
4.089 |
CA |
O |
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GLY | H:127 | H:130 | 2.0 | 0.027 | E | -116.6 | 137.9 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 88.72 | 4e-120 |
X-RAY |
2018-11-07 | GLY | D:127 | D:130 | 1.0 | 0.013 | E | -116.2 | 135.8 | 1.0 | 0.013 | 0.0 | ||||||
GLY | H:127 | H:130 | 1.0 | 0.013 | E | -115.9 | 137.0 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 88.72 | 4e-120 |
X-RAY |
2018-11-07 | GLY | D:127 | D:130 | 2.0 | 0.027 | E | -127.7 | 133.2 | 2.0 | 0.027 | 0.0 |
HOH |
7.587 |
O |
O |
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GLY | H:127 | H:130 | 2.0 | 0.027 | E | -121.1 | 138.2 | NA | NA | NA | |||||||||||||
5knm | 3 | Q8NHL6 | 86.87 | 3e-118 |
X-RAY |
2017-06-14 | GLY | C:199 | D:130 | 4.0 | 0.053 | E | -89.0 | 151.1 | 4.0 | 0.053 | 0.0 | ||||||
1vdg | 1 | Q8NHL6 | 86.8 | 2e-117 |
X-RAY |
2005-08-02 | GLY | A:130 | A:130 | 1.0 | 0.013 | E | -144.1 | 135.8 | 0.0 | 0.0 | 0.013 |
B:Q8NHL6:0.013 |
HOH |
9.057 |
N |
O |
|
GLY | B:130 | B:130 | 0.0 | 0.0 | E | -142.3 | 145.1 | 0.0 | 0.0 | 0.0 |
HOH |
7.578 |
CA |
O |
|||||||||
2gw5 | 1 | Q8N423 | 80.81 | 2e-105 |
X-RAY |
2006-06-20 | GLY | A:129 | A:130 | 0.0 | 0.0 | E | -159.9 | 170.9 | 0.0 | 0.0 | 0.0 |
HOH |
4.074 |
CA |
O |
||
6bcs | 1 | A0A0G2JNQ7 | 80.81 | 2e-105 |
X-RAY |
2018-09-05 | GLY | A:130 | A:130 | 1.0 | 0.013 | E | -159.6 | 172.1 | 1.0 | 0.013 | 0.0 |
BEN BEN CL HOH |
7.410 6.984 9.083 4.028 |
N C CA CA |
N2 C5 CL O |
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2dyp | 4 | Q8N423 | 81.12 | 3e-105 |
X-RAY |
2006-11-07 | GLY | D:129 | D:129 | 0.0 | 0.0 | E | -171.5 | 170.2 | 0.0 | 0.0 | 0.0 |
HOH |
8.053 |
O |
O |
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2otp | 1 | Q8N149 | 80.3 | 1e-104 |
X-RAY |
2008-02-19 | GLY | A:128 | A:128 | 48.0 | 0.64 | -157.8 | 119.4 | 3.0 | 0.04 | 0.6 |
B:Q8N149:0.6 |
HOH |
6.706 |
CA |
O |
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GLY | B:128 | B:128 | 46.0 | 0.613 | -112.4 | 110.2 | 2.0 | 0.027 | 0.586 |
A:Q8N149:0.587 |
HOH |
7.308 |
CA |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-o75019-f1 | 1 | O75019 | 100.0 | 0.0 | SER | A:153 | A:153 | 10.0 | 0.087 | E | -162.2 | 165.0 | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 85.39 | 0.0 | GLY | A:153 | A:153 | 0.0 | 0.0 | E | -152.3 | 154.9 | |
af-q8n423-f1 | 1 | Q8N423 | 84.62 | 0.0 | GLY | A:152 | A:152 | 3.0 | 0.04 | E | -165.4 | 169.7 | |
af-q8nhl6-f1 | 1 | Q8NHL6 | 84.73 | 0.0 | GLY | A:153 | A:153 | 2.0 | 0.027 | E | -130.5 | 137.0 |