Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55106696 . C A CCDS12901.1:NM_006863.3:c.490Cac>Aac_NP_006854.1:p.164H>N Homo sapiens leukocyte immunoglobulin like receptor A1 (LILRA1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aee 4 A0A0G2JQ44 85.46 0.0 X-RAY
 2019-07-31 HIS G:140 G:141 113.0 0.579 -57.0 147.1 113.0 0.579 0.0
HIS H:140 NA:NA DO NA DO DO DO NA NA NA
6zdx 2 A0A0G2JQ46 84.21 0.0 X-RAY
 2020-07-22 HIS B:172 B:141 150.0 0.769 -93.8 151.5 150.0 0.769 0.0
6aed 1 Q8N423 84.63 0.0 X-RAY
 2019-07-31 HIS A:140 NA:NA DO NA DO DO DO NA NA NA
1ugn 1 Q8NHL6 88.89 7e-122 X-RAY
 2004-08-10 HIS A:141 NA:NA DO NA DO DO DO NA NA NA
3d2u 3 Q8NHL6 88.38 3e-121 X-RAY
 2008-07-08 HIS C:141 NA:NA DO NA DO DO DO NA NA NA
HIS F:141 NA:NA DO NA DO DO DO NA NA NA
1g0x 1 Q8NHL6 88.78 1e-120 X-RAY
 2001-01-17 HIS A:140 A:141 117.0 0.6 360.0 144.8 117.0 0.6 0.0 HOH
 2.833
 N
 O
1p7q 4 Q8NHL6 88.78 1e-120 X-RAY
 2003-10-14 HIS D:140 D:141 159.0 0.815 360.0 163.1 159.0 0.815 0.0
1ufu 1 Q8NHL6 88.78 1e-120 X-RAY
 2004-08-10 HIS A:140 NA:NA DO NA DO DO DO NA NA NA
6k60 4 A0A0G2JQ44 88.32 1e-120 X-RAY
 2019-11-27 HIS D:142 NA:NA DO NA DO DO DO NA NA NA
HIS H:142 NA:NA DO NA DO DO DO NA NA NA
4no0 4 Q8NHL6 88.72 4e-120 X-RAY
 2014-11-19 HIS D:138 D:141 135.0 0.692 -55.2 137.8 135.0 0.692 0.0 HOH
 7.851
 ND1
 O
6ewa 4 D9IDM8 88.72 4e-120 X-RAY
 2018-11-07 HIS D:138 NA:NA DO NA DO DO DO NA NA NA
HIS H:138 NA:NA DO NA DO DO DO NA NA NA
6ewc 4 A0A0G2JQ44 88.72 4e-120 X-RAY
 2018-11-07 HIS D:138 NA:NA DO NA DO DO DO NA NA NA
HIS H:138 NA:NA DO NA DO DO DO NA NA NA
6ewo 4 D9IDM8 88.72 4e-120 X-RAY
 2018-11-07 HIS D:138 NA:NA DO NA DO DO DO NA NA NA
HIS H:138 NA:NA DO NA DO DO DO NA NA NA
5knm 3 Q8NHL6 86.87 3e-118 X-RAY
 2017-06-14 HIS C:210 D:141 137.0 NA 360.0 -57.6 137.0 NA NA
1vdg 1 Q8NHL6 86.8 2e-117 X-RAY
 2005-08-02 HIS A:141 NA:NA DO NA DO DO DO NA NA NA
HIS B:141 NA:NA DO NA DO DO DO NA NA NA
2gw5 1 Q8N423 80.81 2e-105 X-RAY
 2006-06-20 HIS A:140 NA:NA DO NA DO DO DO NA NA NA
6bcs 1 A0A0G2JNQ7 80.81 2e-105 X-RAY
 2018-09-05 HIS A:141 A:141 163.0 0.836 -74.9 168.7 163.0 0.836 0.0 BEN
HOH
 6.864
9.611
 C
ND1
 C2
O
2dyp 4 Q8N423 81.12 3e-105 X-RAY
 2006-11-07 HIS D:140 D:140 148.0 0.759 69.6 100.3 148.0 0.759 0.0 HOH
 9.803
 CD2
 O
2otp 1 Q8N149 80.3 1e-104 X-RAY
 2008-02-19 HIS A:139 A:139 152.0 0.779 -113.6 161.7 152.0 0.779 0.0 HOH
 3.485
 O
 O
HIS B:139 B:139 85.0 0.436 -68.2 144.9 83.0 0.426 0.01 A:Q8N149:0.01
 HOH
 3.632
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o75019-f1 1 O75019 100.0 0.0 HIS A:164 A:164 111.0 0.569 S -124.5 121.2
af-q8n6c8-f1 1 Q8N6C8 85.39 0.0 HIS A:164 A:164 100.0 0.513 S -122.1 126.1
af-q8n423-f1 1 Q8N423 84.62 0.0 HIS A:163 A:163 95.0 0.487 S -129.5 132.0
af-q8nhl6-f1 1 Q8NHL6 84.73 0.0 HIS A:164 A:164 128.0 0.656 -57.9 142.4