Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55143157 . G A CCDS42614.1:NM_001081637.1:c.277Gca>Aca_NP_001075106.1:p.93A>T Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1 (LILRB1), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6zdx 2 A0A0G2JQ46 99.75 0.0 X-RAY
2020-07-22 ALA B:101 B:70 9.0 0.078 -52.3 140.5 9.0 0.078 0.0
6aee 4 A0A0G2JQ44 99.24 0.0 X-RAY
2019-07-31 ALA G:69 G:70 9.0 0.078 -63.0 141.0 9.0 0.078 0.0
ALA H:69 H:70 13.0 0.113 -77.0 149.0 NA NA NA
5knm 3 Q8NHL6 100.0 1e-142 X-RAY
2017-06-14 ALA C:139 D:70 15.0 0.13 -69.1 136.5 15.0 0.13 0.0
1vdg 1 Q8NHL6 100.0 5e-142 X-RAY
2005-08-02 ALA A:70 A:70 9.0 0.078 -51.2 154.9 9.0 0.078 0.0 HOH
4.810
CB
O
ALA B:70 B:70 11.0 0.096 -59.3 147.4 11.0 0.096 0.0 HOH
2.859
O
O
3d2u 3 Q8NHL6 98.48 9e-140 X-RAY
2008-07-08 ALA C:70 D:70 12.0 0.104 -49.7 138.6 12.0 0.104 0.0 HOH
2.832
O
O
ALA F:70 H:70 12.0 0.104 -52.9 140.6 NA NA NA
6k60 4 A0A0G2JQ44 98.48 4e-139 X-RAY
2019-11-27 ALA D:71 D:70 15.0 0.13 -85.5 124.7 15.0 0.13 0.0
ALA H:71 H:70 6.0 0.052 -58.0 164.2 NA NA NA
1ugn 1 Q8NHL6 97.98 4e-139 X-RAY
2004-08-10 THR A:70 A:70 14.0 0.1 -58.9 151.6 14.0 0.1 0.0 HOH
2.735
OG1
O
1g0x 1 Q8NHL6 98.48 6e-139 X-RAY
2001-01-17 ALA A:69 A:70 9.0 0.078 -56.1 141.9 9.0 0.078 0.0 HOH
2.595
O
O
1p7q 4 Q8NHL6 98.48 6e-139 X-RAY
2003-10-14 ALA D:69 D:70 6.0 0.052 -15.3 115.9 6.0 0.052 0.0
1ufu 1 Q8NHL6 98.48 6e-139 X-RAY
2004-08-10 ALA A:69 A:70 10.0 0.087 -64.6 137.7 10.0 0.087 0.0
4no0 4 Q8NHL6 98.46 6e-137 X-RAY
2014-11-19 ALA D:67 D:70 9.0 0.078 -75.1 133.0 9.0 0.078 0.0 HOH
5.606
O
O
6ewa 4 D9IDM8 98.46 6e-137 X-RAY
2018-11-07 ALA D:67 D:70 7.0 0.061 -60.8 137.3 7.0 0.061 0.0 HOH
8.482
CB
O
ALA H:67 H:70 10.0 0.087 -63.4 145.1 NA NA NA
6ewc 4 A0A0G2JQ44 98.46 6e-137 X-RAY
2018-11-07 ALA D:67 D:70 11.0 0.096 -59.2 135.2 11.0 0.096 0.0
ALA H:67 H:70 11.0 0.096 -59.0 134.4 NA NA NA
6ewo 4 D9IDM8 98.46 6e-137 X-RAY
2018-11-07 ALA D:67 D:70 6.0 0.052 -63.9 141.4 6.0 0.052 0.0 HOH
4.580
CB
O
ALA H:67 H:70 11.0 0.096 -69.9 145.6 NA NA NA
2gw5 1 Q8N423 80.3 7e-103 X-RAY
2006-06-20 THR A:70 A:70 5.0 0.036 -72.6 151.1 5.0 0.036 0.0 IPA
HOH
9.916
3.293
O
OG1
C3
O
6bcs 1 A0A0G2JNQ7 80.3 7e-103 X-RAY
2018-09-05 THR A:71 A:70 21.0 0.15 -76.5 155.6 21.0 0.15 0.0 BEN
BEN
CL
DMS
HOH
9.661
9.859
7.606
7.585
3.751
O
CB
CG2
OG1
OG1
C4
C3
CL
O
O
2otp 1 Q8N149 80.3 8e-103 X-RAY
2008-02-19 ALA A:69 A:69 40.0 0.348 -80.0 124.5 17.0 0.148 0.2 B:Q8N149:0.2
HOH
2.621
O
O
ALA B:69 B:69 40.0 0.348 -63.4 106.6 14.0 0.122 0.226 A:Q8N149:0.226
HOH
3.383
O
O
2dyp 4 Q8N423 80.61 1e-102 X-RAY
2006-11-07 THR D:70 D:70 13.0 0.093 -74.5 158.0 13.0 0.093 0.0 HOH
3.036
OG1
O
3q2c 1 Q8N6C8 89.69 4e-52 X-RAY
2011-07-13 ALA A:70 A:70 38.0 0.33 -58.6 144.6 38.0 0.33 0.0 HOH
5.133
O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8nhl6-f1 1 Q8NHL6 100.0 0.0 ALA A:93 A:93 8.0 0.07 -60.5 148.1
af-q8n6c8-f1 1 Q8N6C8 84.02 0.0 ALA A:93 A:93 10.0 0.087 -62.8 146.1
af-o75019-f1 1 O75019 80.48 0.0 THR A:93 A:93 16.0 0.114 -68.2 156.7