Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55143540 . G A CCDS42614.1:NM_001081637.1:c.513caG>caA_NP_001075106.1:p.171Q>Q Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1 (LILRB1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6zdx 2 A0A0G2JQ46 99.75 0.0 X-RAY
 2020-07-22 GLN B:179 B:148 130.0 0.722 S -108.0 -33.7 130.0 0.722 0.0
6aee 4 A0A0G2JQ44 99.24 0.0 X-RAY
 2019-07-31 GLN G:147 NA:NA DO NA DO DO DO NA NA NA
GLN H:147 NA:NA DO NA DO DO DO NA NA NA
5knm 3 Q8NHL6 100.0 1e-142 X-RAY
 2017-06-14 GLN C:217 D:148 148.0 0.822 -93.6 175.7 148.0 0.822 0.0
1vdg 1 Q8NHL6 100.0 5e-142 X-RAY
 2005-08-02 GLN A:148 A:148 136.0 0.756 -96.1 169.5 27.0 0.15 0.606 B:Q8NHL6:0.606
 HOH
 3.405
 O
 O
GLN B:148 B:148 96.0 0.533 -129.4 176.7 19.0 0.106 0.427 A:Q8NHL6:0.428
 HOH
 9.650
 CB
 O
3d2u 3 Q8NHL6 98.48 9e-140 X-RAY
 2008-07-08 GLN C:148 NA:NA DO NA DO DO DO NA NA NA
GLN F:148 NA:NA DO NA DO DO DO NA NA NA
6k60 4 A0A0G2JQ44 98.48 4e-139 X-RAY
 2019-11-27 GLN D:149 D:148 134.0 0.744 -167.4 167.0 134.0 0.744 0.0
GLN H:149 NA:NA DO NA DO DO DO NA NA NA
1ugn 1 Q8NHL6 97.98 4e-139 X-RAY
 2004-08-10 GLN A:148 NA:NA DO NA DO DO DO NA NA NA
1g0x 1 Q8NHL6 98.48 6e-139 X-RAY
 2001-01-17 GLN A:147 A:148 105.0 0.583 -80.6 147.5 105.0 0.583 0.0 HOH
 2.673
 N
 O
1p7q 4 Q8NHL6 98.48 6e-139 X-RAY
 2003-10-14 GLN D:147 D:148 148.0 0.822 -117.6 163.5 148.0 0.822 0.0
1ufu 1 Q8NHL6 98.48 6e-139 X-RAY
 2004-08-10 GLN A:147 NA:NA DO NA DO DO DO NA NA NA
4no0 4 Q8NHL6 98.46 6e-137 X-RAY
 2014-11-19 GLN D:145 D:148 130.0 0.722 -113.5 173.1 130.0 0.722 0.0 HOH
 2.986
 O
 O
6ewa 4 D9IDM8 98.46 6e-137 X-RAY
 2018-11-07 GLN D:145 D:148 151.0 0.839 -91.0 172.6 151.0 0.839 0.0 HOH
 3.784
 CA
 O
GLN H:145 H:148 160.0 0.889 -92.6 149.5 NA NA NA
6ewc 4 A0A0G2JQ44 98.46 6e-137 X-RAY
 2018-11-07 GLN D:145 D:148 130.0 0.722 -151.8 162.6 130.0 0.722 0.0
GLN H:145 H:148 129.0 0.717 -150.2 160.0 NA NA NA
6ewo 4 D9IDM8 98.46 6e-137 X-RAY
 2018-11-07 GLN D:145 D:148 155.0 0.861 -71.0 167.1 155.0 0.861 0.0 HOH
 3.043
 O
 O
GLN H:145 H:148 154.0 0.856 -82.8 147.1 NA NA NA
2gw5 1 Q8N423 80.3 7e-103 X-RAY
 2006-06-20 GLN A:147 A:148 67.0 NA -51.8 131.6 67.0 NA NA HOH
 2.411
 O
 O
6bcs 1 A0A0G2JNQ7 80.3 7e-103 X-RAY
 2018-09-05 GLN A:148 A:148 65.0 NA -74.8 121.0 65.0 NA NA BEN
CL
HOH
 9.542
5.361
2.616
 N
N
O
 C6
CL
O
2otp 1 Q8N149 80.3 8e-103 X-RAY
 2008-02-19 HIS A:146 A:146 99.0 0.508 E -132.5 167.2 75.0 0.385 0.123 B:Q8N149:0.123
 HOH
 3.442
 NE2
 O
HIS B:146 B:146 87.0 0.446 E -113.2 159.9 79.0 0.405 0.041 A:Q8N149:0.041
 HOH
 3.013
 CE1
 O
2dyp 4 Q8N423 80.61 1e-102 X-RAY
 2006-11-07 GLN D:147 D:147 186.0 1.0 -156.0 360.0 186.0 1.0 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8nhl6-f1 1 Q8NHL6 100.0 0.0 GLN A:171 A:171 166.0 0.922 -59.4 143.5
af-q8n6c8-f1 1 Q8N6C8 84.02 0.0 HIS A:171 A:171 164.0 0.841 -55.1 132.3
af-o75019-f1 1 O75019 80.48 0.0 GLN A:171 A:171 150.0 0.833 -59.6 133.2