Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 6714373 | . | C | A | CCDS32883.1:NM_000064.2:c.589Gaa>Taa_NP_000055.2:p.197E>* | Homo sapiens complement component 3 (C3), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
2wii | 1 | P01024 | 100.0 | 0.0 |
X-RAY |
2009-06-09 | GLU | A:175 | A:175 | 147.0 | 0.774 | S | -55.9 | -40.3 | 114.0 | 0.6 | 0.174 |
B:P01024:0.174 |
GOL GOL HOH |
6.782 9.469 7.629 |
CB OE2 N |
C1 C3 O |
|
2win | 1 | P01024 | 100.0 | 0.0 |
X-RAY |
2009-06-09 | GLU | A:175 | A:175 | 134.0 | 0.705 | S | -60.1 | -44.3 | 81.0 | 0.426 | 0.279 |
B:P01024:0.279 |
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GLU | C:175 | C:175 | 137.0 | 0.721 | S | -60.1 | -44.4 | NA | NA | NA | |||||||||||||
GLU | E:175 | E:175 | 136.0 | 0.716 | S | -60.1 | -44.3 | NA | NA | NA | |||||||||||||
GLU | G:175 | G:175 | 138.0 | 0.726 | S | -60.2 | -44.3 | 85.0 | 0.447 | 0.279 |
H:P01024:0.279 |
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2xwj | 1 | P01024 | 100.0 | 0.0 |
X-RAY |
2011-01-12 | GLU | A:175 | A:175 | 143.0 | 0.753 | S | -56.6 | -48.9 | 70.0 | 0.368 | 0.385 |
B:P01024:0.147 I:P00751:0.237 |
NAG |
9.916 |
O |
O6 |
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GLU | C:175 | C:175 | 141.0 | 0.742 | S | -56.5 | -49.0 | NA | NA | NA | |||||||||||||
GLU | E:175 | E:175 | 143.0 | 0.753 | S | -56.1 | -49.3 | NA | NA | NA | |||||||||||||
GLU | G:175 | G:175 | 142.0 | 0.747 | S | -56.8 | -49.0 | NA | NA | NA | |||||||||||||
3l3o | 1 | P01024 | 100.0 | 0.0 |
X-RAY |
2010-08-04 | GLU | A:175 | A:175 | 146.0 | 0.768 | S | -69.0 | -49.4 | 120.0 | 0.632 | 0.136 |
B:P01024:0.137 |
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GLU | F:175 | D:175 | 149.0 | 0.784 | S | -69.0 | -49.4 | NA | NA | NA | |||||||||||||
3l5n | 1 | P01024 | 100.0 | 0.0 |
X-RAY |
2010-08-04 | GLU | A:175 | A:175 | 143.0 | 0.753 | S | -53.7 | -47.7 | 76.0 | 0.4 | 0.353 |
B:P01024:0.353 |
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3nms | 1 | P01024 | 100.0 | 0.0 |
X-RAY |
2010-08-04 | GLU | A:175 | A:175 | 148.0 | 0.779 | S | -69.0 | -49.3 | 122.0 | 0.642 | 0.137 |
D:P01024:0.137 |
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3ohx | 1 | P01024 | 100.0 | 0.0 |
X-RAY |
2010-09-01 | GLU | A:175 | A:175 | 149.0 | 0.784 | S | -69.0 | -49.4 | 123.0 | 0.647 | 0.137 |
B:P01024:0.137 |
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GLU | H:175 | D:175 | 149.0 | 0.784 | S | -69.0 | -49.5 | NA | NA | NA | |||||||||||||
3t4a | 1 | P01024 | 100.0 | 0.0 |
X-RAY |
2011-11-23 | GLU | A:175 | A:175 | 145.0 | 0.763 | S | -62.2 | -30.9 | 118.0 | 0.621 | 0.142 |
B:P01024:0.142 |
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GLU | D:175 | D:175 | 146.0 | 0.768 | S | -62.2 | -30.9 | NA | NA | NA | |||||||||||||
5fo7 | 1 | P01024 | 100.0 | 0.0 |
X-RAY |
2016-04-06 | GLU | A:175 | A:197 | 147.0 | 0.774 | S | -64.5 | -53.5 | 108.0 | 0.568 | 0.206 |
B:P01024:0.205 |
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5fo8 | 1 | P01024 | 100.0 | 0.0 |
X-RAY |
2016-04-06 | GLU | A:175 | A:197 | 143.0 | 0.753 | S | -60.6 | -42.2 | 112.0 | 0.589 | 0.164 |
B:P01024:0.163 |
NAG HOH |
9.186 3.069 |
O O |
O7 O |
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5fo9 | 1 | P01024 | 100.0 | 0.0 |
X-RAY |
2016-04-06 | GLU | A:175 | A:197 | 139.0 | 0.732 | S | -75.6 | -34.5 | NA | NA | NA | ||||||
GLU | D:175 | D:197 | 141.0 | 0.742 | S | -76.4 | -34.8 | 78.0 | 0.411 | 0.331 |
E:P01024:0.332 |
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5foa | 1 | P01024 | 100.0 | 0.0 |
X-RAY |
2016-04-06 | GLU | A:175 | A:197 | 131.0 | 0.689 | S | -66.6 | -27.1 | 93.0 | 0.489 | 0.2 |
B:P01024:0.2 |
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GLU | C:175 | C:197 | 147.0 | 0.774 | S | -65.8 | -27.5 | NA | NA | NA | |||||||||||||
5fob | 1 | P01024 | 100.0 | 0.0 |
X-RAY |
2016-04-06 | GLU | A:175 | A:197 | 143.0 | 0.753 | S | -68.5 | -37.2 | 96.0 | 0.505 | 0.248 |
B:P01024:0.247 |
GOL GOL HOH |
9.830 7.947 3.123 |
O OE1 O |
O2 O3 O |
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5o32 | 1 | P01024 | 100.0 | 0.0 |
X-RAY |
2017-06-28 | GLU | A:175 | A:197 | 145.0 | 0.763 | S | -64.9 | -55.0 | 70.0 | 0.368 | 0.395 |
B:P01024:0.089 E:P05156:0.305 |
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GLU | F:175 | E:197 | 153.0 | 0.805 | S | -65.6 | -56.5 | 63.0 | 0.332 | 0.473 |
J:P05156:0.337 G:P01024:0.168 |
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5o35 | 1 | P01024 | 100.0 | 0.0 |
X-RAY |
2017-06-28 | GLU | A:175 | A:197 | 140.0 | 0.737 | S | -64.5 | -54.0 | 114.0 | 0.6 | 0.137 |
B:P01024:0.137 |
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6rur | 3 | P01024 | 100.0 | 0.0 |
X-RAY |
2019-08-21 | GLU | E:175 | A:175 | 165.0 | 0.868 | S | -71.9 | -33.8 | 86.0 | 0.453 | 0.415 |
F:P01024:0.416 |
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GLU | G:175 | G:175 | 140.0 | 0.737 | S | -69.5 | -33.9 | 52.0 | 0.274 | 0.463 |
H:P01024:0.463 |
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6ruv | 4 | P01024 | 100.0 | 0.0 |
X-RAY |
2019-08-21 | GLU | G:175 | A:175 | 161.0 | 0.847 | S | -74.9 | -24.1 | 91.0 | 0.479 | 0.368 |
H:P01024:0.368 |
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GLU | I:175 | G:175 | 155.0 | 0.816 | S | -74.4 | -23.5 | 90.0 | 0.474 | 0.342 |
J:P01024:0.342 |
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7bag | 1 | P01024 | 100.0 | 0.0 |
X-RAY |
2022-01-12 | GLU | A:175 | A:175 | 139.0 | 0.732 | S | -68.6 | -34.9 | 89.0 | 0.468 | 0.264 |
B:P01024:0.263 |
HOH |
3.100 |
OE2 |
O |
|
6ru5 | 1 | P01024 | 99.84 | 0.0 |
X-RAY |
2019-08-21 | GLU | A:175 | A:197 | 159.0 | 0.837 | S | -73.5 | -24.2 | 136.0 | 0.716 | 0.121 |
B:P01024:0.121 |
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3g6j | 1 | P01024 | 100.0 | 0.0 |
X-RAY |
2009-03-10 | GLU | A:175 | A:175 | 133.0 | 0.7 | S | -70.9 | -58.7 | 96.0 | 0.505 | 0.195 |
B:P01024:0.195 |
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GLU | C:175 | C:175 | 147.0 | 0.774 | S | -64.4 | -37.9 | NA | NA | NA | |||||||||||||
6yo6 | 1 | ? | 99.69 | 0.0 |
X-RAY |
2021-02-24 | GLU | A:175 | A:197 | 140.0 | 0.737 | S | -70.9 | -44.9 | 68.0 | 0.358 | 0.379 |
B:None:0.379 |
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2i07 | 1 | P01024 | 99.84 | 0.0 |
X-RAY |
2006-10-24 | GLU | A:175 | A:175 | 148.0 | 0.779 | S | -66.0 | -27.2 | 80.0 | 0.421 | 0.358 |
B:P01024:0.358 |
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6ehg | 1 | P01024 | 99.69 | 0.0 |
X-RAY |
2018-02-14 | GLU | A:175 | A:197 | 139.0 | 0.732 | S | -70.9 | -44.9 | 69.0 | 0.363 | 0.369 |
B:P01024:0.368 |
NAG |
9.711 |
O |
O7 |
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2xwb | 1 | P01024 | 100.0 | 0.0 |
X-RAY |
2011-01-12 | GLU | A:175 | A:175 | 137.0 | 0.721 | T | -60.4 | -40.5 | 75.0 | 0.395 | 0.326 |
B:P01024:0.111 E:P00751:0.211 |
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GLU | C:175 | C:175 | 138.0 | 0.726 | T | -60.7 | -40.0 | NA | NA | NA | |||||||||||||
2a73 | 1 | P01024 | 99.84 | 0.0 |
X-RAY |
2005-09-27 | GLU | A:175 | A:175 | 156.0 | 0.821 | S | -74.9 | -7.0 | 125.0 | 0.658 | 0.163 |
B:P01024:0.163 |
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2a74 | 1 | P01024 | 99.84 | 0.0 |
X-RAY |
2005-09-27 | GLU | A:175 | A:175 | 143.0 | 0.753 | S | -71.1 | -31.8 | 109.0 | 0.574 | 0.179 |
B:P01024:0.179 |
HOH |
3.158 |
O |
O |
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GLU | D:175 | D:175 | 148.0 | 0.779 | S | -64.6 | -36.1 | NA | NA | NA | |||||||||||||
2qki | 1 | P01024 | 99.84 | 0.0 |
X-RAY |
2007-08-14 | GLU | A:175 | A:175 | 137.0 | 0.721 | S | -58.3 | -36.8 | 100.0 | 0.526 | 0.195 |
B:P01024:0.195 |
BR HOH |
8.744 6.174 |
C OE1 |
BR O |
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GLU | D:175 | D:175 | 142.0 | 0.747 | S | -75.2 | -33.4 | NA | NA | NA | |||||||||||||
2ice | 1 | P01024 | 99.84 | 0.0 |
X-RAY |
2006-11-07 | GLU | A:175 | A:175 | 144.0 | 0.758 | S | -61.9 | -42.7 | 114.0 | 0.6 | 0.158 |
B:P01024:0.158 |
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GLU | E:175 | D:175 | 145.0 | 0.763 | S | -66.3 | -45.1 | NA | NA | NA | |||||||||||||
2icf | 1 | P01024 | 99.84 | 0.0 |
X-RAY |
2006-11-07 | GLU | A:175 | A:175 | 156.0 | 0.821 | S | -69.3 | -17.8 | 135.0 | 0.711 | 0.11 |
B:P01024:0.111 |
NAG |
9.187 |
O |
O4 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p01024-f1 | 1 | P01024 | 100.0 | 0.0 | GLU | A:197 | A:197 | 110.0 | 0.579 | S | -54.5 | -23.6 |