Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 10191590 . C A CCDS2597.1:NM_000551.3:c.583Cag>Aag_NP_000542.1:p.195Q>K Homo sapiens von Hippel-Lindau tumor suppressor (VHL), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4wqo 1 P40337 100.0 4e-156 X-RAY
2015-03-04 GLN A:215 A:195 110.0 0.611 H -59.2 -41.5 110.0 0.611 0.0
7q2j 3 P40337 94.25 1e-118 X-RAY
2021-11-24 GLN C:179 C:195 136.0 0.756 H -42.7 -54.4 136.0 0.756 0.0 HOH
7.564
C
O
4b9k 3 P40337 95.32 3e-118 X-RAY
2012-10-24 GLN C:153 C:195 53.0 NA H -53.1 -48.5 53.0 NA NA HOH
2.896
N
O
GLN F:153 F:195 45.0 NA H -57.2 -39.8 NA NA NA
GLN I:153 I:195 116.0 0.644 H -56.7 -45.8 NA NA NA
GLN L:153 L:195 120.0 0.667 H -56.3 -46.5 NA NA NA
1lqb 3 P40337 99.38 4e-117 X-RAY
2002-07-03 GLN C:144 C:195 105.0 0.583 H -59.0 -51.5 105.0 0.583 0.0 HOH
5.843
N
O
3ztd 3 P40337 99.38 4e-117 X-RAY
2012-07-25 GLN C:144 C:195 82.0 0.456 H -60.0 -60.3 82.0 0.456 0.0
GLN F:144 F:195 79.0 0.439 H -54.9 -57.5 NA NA NA
GLN I:144 I:195 73.0 0.406 H -66.2 -49.6 NA NA NA
GLN L:144 L:195 91.0 0.506 H -57.8 -51.2 NA NA NA
4b95 3 P40337 99.38 4e-117 X-RAY
2012-10-24 GLN C:144 C:195 60.0 NA H -54.7 -45.7 60.0 NA NA HOH
5.232
N
O
GLN F:144 F:195 75.0 NA H -53.1 -49.3 NA NA NA
GLN I:144 I:195 61.0 NA H -53.7 -49.8 NA NA NA
GLN L:144 L:195 127.0 0.706 H -51.6 -51.2 NA NA NA
4bks 3 P40337 99.38 4e-117 X-RAY
2013-11-27 GLN C:144 C:195 57.0 NA H -54.1 -45.8 57.0 NA NA HOH
4.664
N
O
GLN F:144 F:195 65.0 NA H -56.3 -41.3 NA NA NA
GLN I:144 I:195 121.0 0.672 H -56.7 -44.1 NA NA NA
GLN L:144 L:195 122.0 0.678 H -55.5 -46.2 NA NA NA
4bkt 3 P40337 99.38 4e-117 X-RAY
2013-11-27 GLN C:144 C:195 56.0 NA H -55.5 -48.6 56.0 NA NA HOH
4.847
N
O
GLN F:144 F:195 86.0 0.478 H -55.8 -47.9 NA NA NA
GLN I:144 I:195 118.0 0.656 H -58.8 -47.5 NA NA NA
GLN L:144 L:195 114.0 0.633 H -55.1 -48.7 NA NA NA
4w9c 3 P40337 99.38 4e-117 X-RAY
2014-09-10 GLN C:144 C:195 98.0 0.544 H -53.0 -46.9 98.0 0.544 0.0 HOH
3.874
OE1
O
GLN F:144 F:195 98.0 0.544 H -49.5 -51.0 NA NA NA
GLN I:144 I:195 116.0 0.644 H -59.5 -45.5 NA NA NA
GLN L:144 L:195 119.0 0.661 H -59.8 -45.6 NA NA NA
4w9d 3 P40337 99.38 4e-117 X-RAY
2014-09-10 GLN C:144 C:195 94.0 0.522 H -52.0 -49.2 94.0 0.522 0.0 HOH
3.903
OE1
O
GLN F:144 F:195 83.0 0.461 H -52.8 -41.1 NA NA NA
GLN I:144 I:195 114.0 0.633 H -58.3 -42.2 NA NA NA
GLN L:144 L:195 119.0 0.661 H -60.0 -47.9 NA NA NA
4w9e 3 P40337 99.38 4e-117 X-RAY
2014-09-10 GLN C:144 C:195 97.0 0.539 H -58.9 -41.2 97.0 0.539 0.0 HOH
3.053
OE1
O
GLN F:144 F:195 90.0 0.5 H -60.3 -41.2 NA NA NA
GLN I:144 I:195 113.0 0.628 H -59.7 -42.9 NA NA NA
GLN L:144 L:195 118.0 0.656 H -58.9 -49.4 NA NA NA
4w9f 3 P40337 99.38 4e-117 X-RAY
2014-09-10 GLN C:144 C:195 56.0 NA H -56.3 -55.2 56.0 NA NA HOH
6.315
CA
O
GLN F:144 F:195 118.0 0.656 H -55.8 -49.8 NA NA NA
GLN I:144 I:195 116.0 0.644 H -55.6 -45.6 NA NA NA
GLN L:144 L:195 118.0 0.656 H -56.4 -48.6 NA NA NA
4w9g 3 P40337 99.38 4e-117 X-RAY
2014-09-10 GLN C:144 C:195 92.0 0.511 H -59.4 -39.7 92.0 0.511 0.0 HOH
3.915
OE1
O
GLN F:144 F:195 90.0 0.5 H -60.1 -39.6 NA NA NA
GLN I:144 I:195 107.0 0.594 H -54.8 -42.9 NA NA NA
GLN L:144 L:195 115.0 0.639 H -58.7 -47.0 NA NA NA
4w9h 3 P40337 99.38 4e-117 X-RAY
2014-09-10 GLN C:144 C:195 105.0 0.583 H -56.9 -51.3 105.0 0.583 0.0 HOH
3.761
OE1
O
GLN F:144 F:195 93.0 0.517 H -60.8 -46.7 NA NA NA
GLN I:144 I:195 117.0 0.65 H -59.9 -39.6 NA NA NA
GLN L:144 L:195 98.0 0.544 H -58.8 -48.5 NA NA NA
4w9i 3 P40337 99.38 4e-117 X-RAY
2014-09-10 GLN C:144 C:195 93.0 0.517 H -55.0 -41.8 93.0 0.517 0.0 HOH
3.435
NE2
O
GLN F:144 F:195 87.0 0.483 H -57.4 -44.7 NA NA NA
GLN I:144 I:195 113.0 0.628 H -55.4 -40.4 NA NA NA
GLN L:144 L:195 88.0 0.489 H -54.1 -40.7 NA NA NA
4w9j 3 P40337 99.38 4e-117 X-RAY
2014-09-10 GLN C:144 C:195 93.0 0.517 H -58.3 -40.8 93.0 0.517 0.0 HOH
3.954
OE1
O
GLN F:144 F:195 95.0 0.528 H -52.5 -46.5 NA NA NA
GLN I:144 I:195 108.0 0.6 H -61.4 -41.0 NA NA NA
GLN L:144 L:195 115.0 0.639 H -58.7 -43.9 NA NA NA
4w9k 3 P40337 99.38 4e-117 X-RAY
2014-09-10 GLN C:144 C:195 84.0 0.467 H -57.2 -42.1 84.0 0.467 0.0 HOH
4.186
NE2
O
GLN F:144 F:195 79.0 0.439 H -52.0 -45.0 NA NA NA
GLN I:144 I:195 106.0 0.589 H -58.2 -40.8 NA NA NA
GLN L:144 L:195 112.0 0.622 H -60.0 -44.6 NA NA NA
4w9l 3 P40337 99.38 4e-117 X-RAY
2014-09-10 GLN C:144 C:195 92.0 0.511 H -58.5 -43.0 92.0 0.511 0.0 HOH
9.038
N
O
GLN F:144 F:195 93.0 0.517 H -51.9 -46.2 NA NA NA
GLN I:144 I:195 111.0 0.617 H -58.6 -41.9 NA NA NA
GLN L:144 L:195 120.0 0.667 H -57.4 -44.8 NA NA NA
5lli 3 P40337 99.38 4e-117 X-RAY
2016-11-09 GLN C:144 C:195 97.0 0.539 H -56.8 -44.0 97.0 0.539 0.0 HOH
5.843
O
O
GLN F:144 F:195 98.0 0.544 H -57.9 -40.3 NA NA NA
GLN I:144 I:195 117.0 0.65 H -56.9 -40.2 NA NA NA
GLN L:144 L:195 118.0 0.656 H -58.8 -41.9 NA NA NA
5nvv 3 P40337 99.38 4e-117 X-RAY
2017-09-20 GLN C:144 C:195 86.0 0.478 H -58.8 -44.9 86.0 0.478 0.0 HOH
3.434
NE2
O
GLN F:144 F:195 83.0 0.461 H -59.3 -43.3 NA NA NA
GLN I:144 I:195 111.0 0.617 H -59.4 -39.7 NA NA NA
GLN L:144 L:195 117.0 0.65 H -57.2 -48.4 NA NA NA
5nvw 3 P40337 99.38 4e-117 X-RAY
2017-09-20 GLN C:144 C:195 91.0 0.506 H -55.0 -47.9 91.0 0.506 0.0 HOH
5.789
O
O
GLN F:144 F:195 87.0 0.483 H -57.2 -45.8 NA NA NA
GLN I:144 I:195 113.0 0.628 H -58.7 -42.3 NA NA NA
GLN L:144 L:195 114.0 0.633 H -59.7 -46.2 NA NA NA
5nvx 3 P40337 99.38 4e-117 X-RAY
2017-09-20 GLN C:144 C:195 91.0 0.506 H -57.1 -47.6 91.0 0.506 0.0 HOH
4.293
OE1
O
GLN F:144 F:195 88.0 0.489 H -57.9 -42.6 NA NA NA
GLN I:144 I:195 114.0 0.633 H -57.5 -40.4 NA NA NA
GLN L:144 L:195 116.0 0.644 H -60.6 -43.6 NA NA NA
5nvy 3 P40337 99.38 4e-117 X-RAY
2017-09-20 GLN C:144 C:195 95.0 0.528 H -64.2 -39.5 95.0 0.528 0.0 HOH
3.173
OE1
O
GLN F:144 F:195 86.0 0.478 H -61.4 -47.4 NA NA NA
GLN I:144 I:195 98.0 0.544 H -61.1 -44.3 NA NA NA
GLN L:144 L:195 112.0 0.622 H -56.9 -52.1 NA NA NA
5nvz 3 P40337 99.38 4e-117 X-RAY
2017-09-20 GLN C:144 C:195 96.0 0.533 H -57.6 -53.1 96.0 0.533 0.0 HOH
3.832
OE1
O
GLN F:144 F:195 98.0 0.544 H -54.7 -54.9 NA NA NA
GLN I:144 I:195 112.0 0.622 H -52.8 -41.1 NA NA NA
GLN L:144 L:195 117.0 0.65 H -56.9 -55.4 NA NA NA
5nw0 3 P40337 99.38 4e-117 X-RAY
2017-09-20 GLN C:144 C:195 91.0 0.506 H -59.8 -43.6 91.0 0.506 0.0 HOH
3.676
CB
O
GLN F:144 F:195 91.0 0.506 H -50.5 -44.8 NA NA NA
GLN I:144 I:195 113.0 0.628 H -57.9 -39.5 NA NA NA
GLN L:144 L:195 119.0 0.661 H -57.5 -43.4 NA NA NA
5nw1 3 P40337 99.38 4e-117 X-RAY
2017-09-20 GLN C:144 C:195 85.0 0.472 H -56.6 -48.8 85.0 0.472 0.0 HOH
3.030
OE1
O
GLN F:144 F:195 84.0 0.467 H -56.2 -45.7 NA NA NA
GLN I:144 I:195 114.0 0.633 H -56.1 -41.6 NA NA NA
GLN L:144 L:195 120.0 0.667 H -57.9 -43.5 NA NA NA
5nw2 3 P40337 99.38 4e-117 X-RAY
2017-09-20 GLN C:144 C:195 96.0 0.533 H -53.7 -48.8 96.0 0.533 0.0 HOH
3.726
OE1
O
GLN F:144 F:195 86.0 0.478 H -55.9 -46.2 NA NA NA
GLN I:144 I:195 112.0 0.622 H -57.7 -40.3 NA NA NA
GLN L:144 L:195 122.0 0.678 H -57.5 -46.0 NA NA NA
5t35 4 P40337 99.38 4e-117 X-RAY
2017-03-08 GLN D:144 D:195 104.0 0.578 H -58.9 -48.2 104.0 0.578 0.0 HOH
2.754
N
O
GLN H:144 H:195 102.0 0.567 H -59.2 -48.2 NA NA NA
6bvb 1 P40337 99.38 4e-117 X-RAY
2018-08-01 GLN A:144 V:195 64.0 NA H -59.6 -47.3 64.0 NA NA HOH
6.094
N
O
6gfy 3 P40337 99.38 4e-117 X-RAY
2018-07-11 GLN C:144 C:195 100.0 0.556 H -56.1 -49.2 100.0 0.556 0.0 HOH
3.182
OE1
O
GLN F:144 F:195 95.0 0.528 H -58.0 -51.9 NA NA NA
GLN I:144 I:195 111.0 0.617 H -54.7 -40.1 NA NA NA
GLN L:144 L:195 114.0 0.633 H -60.7 -50.1 NA NA NA
6gfz 3 P40337 99.38 4e-117 X-RAY
2018-07-11 GLN C:144 C:195 96.0 0.533 H -47.9 -55.1 96.0 0.533 0.0 HOH
3.379
NE2
O
GLN F:144 F:195 99.0 0.55 H -49.2 -46.4 NA NA NA
GLN I:144 I:195 116.0 0.644 H -55.7 -42.2 NA NA NA
GLN L:144 L:195 121.0 0.672 H -57.6 -48.0 NA NA NA
6gmn 3 P40337 99.38 4e-117 X-RAY
2018-08-08 GLN C:144 C:195 116.0 0.644 H -63.2 -45.0 116.0 0.644 0.0 HOH
2.208
NE2
O
GLN F:144 F:195 106.0 0.589 H -70.4 -28.9 NA NA NA
GLN L:144 L:195 117.0 0.65 H -64.5 -40.1 NA NA NA
6gmn 5 P40337 99.38 4e-117 X-RAY
2018-08-08 GLN I:144 I:195 118.0 0.656 H -66.1 -38.7 NA NA NA
6gmq 3 P40337 99.38 4e-117 X-RAY
2018-08-22 GLN C:144 C:195 63.0 NA H -57.2 -43.9 63.0 NA NA HOH
3.489
CA
O
GLN F:144 F:195 47.0 NA H -57.1 -42.5 NA NA NA
GLN I:144 I:195 129.0 0.717 H -56.7 -45.6 NA NA NA
GLN L:144 L:195 129.0 0.717 H -56.9 -44.1 NA NA NA
6gmx 3 P40337 99.38 4e-117 X-RAY
2018-08-08 GLN C:144 C:195 46.0 NA H -62.2 -39.2 46.0 NA NA HOH
7.509
CB
O
GLN F:144 F:195 122.0 0.678 H -59.3 -42.6 NA NA NA
GLN I:144 I:195 116.0 0.644 H -61.8 -44.7 NA NA NA
GLN L:144 L:195 75.0 0.417 H -62.9 -41.3 NA NA NA
6hax 2 P40337 99.38 4e-117 X-RAY
2019-06-12 GLN B:144 B:195 97.0 0.539 H -61.3 -42.6 97.0 0.539 0.0 HOH
3.998
CG
O
GLN F:144 F:195 112.0 0.622 H -61.8 -42.4 NA NA NA
6hay 2 P40337 99.38 4e-117 X-RAY
2019-06-12 GLN B:144 B:195 93.0 0.517 H -63.4 -42.4 93.0 0.517 0.0 HOH
5.890
OE1
O
GLN F:144 F:195 90.0 0.5 H -63.4 -32.5 NA NA NA
6sis 4 P40337 99.38 4e-117 X-RAY
2019-12-04 GLN D:144 D:195 94.0 0.522 H -57.6 -36.9 94.0 0.522 0.0
GLN H:144 H:195 92.0 0.511 H -57.9 -36.5 NA NA NA
7jto 4 P40337 99.38 4e-117 X-RAY
2021-10-06 GLN D:144 L:195 99.0 0.55 H -63.6 -30.7 99.0 0.55 0.0 HOH
2.378
OE1
O
7jtp 3 P40337 99.38 4e-117 X-RAY
2021-10-06 GLN C:144 L:195 113.0 0.628 H -63.5 -38.9 113.0 0.628 0.0 HOH
6.403
N
O
3zrc 3 P40337 98.77 4e-117 X-RAY
2012-03-07 GLN C:145 C:195 74.0 NA H -58.4 -45.6 74.0 NA NA
GLN F:145 F:195 79.0 0.439 H -57.0 -39.8 NA NA NA
GLN I:145 I:195 93.0 0.517 H -73.9 -33.4 NA NA NA
GLN L:145 L:195 120.0 0.667 H -73.5 -50.6 NA NA NA
3zrf 3 P40337 98.77 4e-117 X-RAY
2012-03-07 GLN C:145 C:195 55.0 NA H -38.6 -52.3 55.0 NA NA HOH
9.868
C
O
GLN F:145 F:195 89.0 0.494 H -53.6 -60.7 NA NA NA
GLN I:145 I:195 71.0 0.394 H -53.4 -67.9 NA NA NA
GLN L:145 L:195 104.0 0.578 H -64.6 -58.2 NA NA NA
3ztc 3 P40337 98.77 4e-117 X-RAY
2012-07-25 GLN C:145 C:195 63.0 NA H -54.7 -47.2 63.0 NA NA
GLN F:145 F:195 83.0 0.461 H -55.0 -43.6 NA NA NA
GLN I:145 I:195 77.0 0.428 H -68.5 -44.1 NA NA NA
GLN L:145 L:195 118.0 0.656 H -64.3 -43.7 NA NA NA
3zun 3 P40337 98.77 4e-117 X-RAY
2012-07-25 GLN C:145 C:195 53.0 NA H -56.2 -44.2 53.0 NA NA HOH
6.520
CB
O
GLN F:145 F:195 44.0 NA H -53.6 -57.9 NA NA NA
GLN I:145 I:195 77.0 0.428 H -68.8 -36.4 NA NA NA
GLN L:145 L:195 129.0 0.717 H -55.1 -49.3 NA NA NA
4ajy 4 P40337 98.77 4e-117 X-RAY
2012-11-14 GLN D:145 V:195 121.0 0.672 H -60.9 -44.3 121.0 0.672 0.0 HOH
2.713
O
O
4awj 3 P40337 98.77 4e-117 X-RAY
2012-11-14 GLN C:145 C:195 65.0 NA H -66.1 -35.1 65.0 NA NA HOH
3.346
CB
O
GLN F:145 F:195 51.0 NA H -57.6 -42.7 NA NA NA
GLN I:145 I:195 102.0 0.567 H -65.6 -41.2 NA NA NA
GLN L:145 L:195 117.0 0.65 H -63.4 -41.5 NA NA NA
6gmr 4 P40337 98.77 4e-117 X-RAY
2018-08-08 GLN D:145 V:195 106.0 0.589 H -67.0 -36.0 106.0 0.589 0.0 F4K
HOH
8.140
3.268
N
OE1
C12
O
1lm8 3 P40337 100.0 6e-117 X-RAY
2002-06-12 GLN C:142 V:195 97.0 0.539 H -59.5 -43.2 97.0 0.539 0.0 HOH
3.484
CG
O
1vcb 3 P40337 100.0 6e-117 X-RAY
1999-04-21 GLN C:142 C:195 75.0 0.417 H -67.7 -35.2 75.0 0.417 0.0 HOH
2.416
NE2
O
GLN F:142 F:195 80.0 0.444 H -66.3 -36.0 NA NA NA
GLN I:142 I:195 73.0 0.406 H -66.6 -38.3 NA NA NA
GLN L:142 L:195 77.0 0.428 H -68.4 -36.0 NA NA NA
5n4w 2 P40337 100.0 6e-117 X-RAY
2017-06-07 GLN B:142 NA:NA DO NA DO DO DO NA NA NA
6gfx 3 P40337 100.0 6e-117 X-RAY
2018-07-11 GLN C:142 C:195 101.0 0.561 H -62.3 -42.6 101.0 0.561 0.0 HOH
3.477
OE1
O
6i7q 4 P40337 100.0 6e-117 X-RAY
2019-11-27 GLN D:142 V:195 119.0 0.661 H -70.5 -32.7 119.0 0.661 0.0 HOH
2.328
H
O
6i7r 4 P40337 100.0 6e-117 X-RAY
2019-11-27 GLN D:142 V:195 85.0 NA H -67.9 -41.3 85.0 NA NA HOH
2.302
H
O
6r7f 9 P40337 100.0 6e-117 EM
2019-08-28 GLN I:142 V:195 104.0 0.578 H -61.6 -41.4 104.0 0.578 0.0
7khh 3 P40337 100.0 6e-116 X-RAY
2021-02-24 GLN C:157 C:195 98.0 0.544 H -59.3 -41.8 98.0 0.544 0.0 HOH
6.646
NE2
O
7cjb 1 P40337 100.0 8e-116 X-RAY
2021-07-14 GLN A:145 A:195 90.0 0.5 H -62.0 -44.2 90.0 0.5 0.0
GLN E:145 E:195 119.0 0.661 H -62.9 -43.6 NA NA NA
GLN I:145 I:195 112.0 0.622 H -61.5 -44.5 NA NA NA
GLN M:145 M:195 125.0 0.694 H -62.4 -44.4 NA NA NA
6zhc 1 P40337 100.0 4e-113 X-RAY
2020-08-05 GLN A:137 AAA:195 133.0 0.739 H -55.7 -48.6 133.0 0.739 0.0 EDO
GOL
IOD
HOH
3.559
9.216
5.604
2.606
CG
C
N
O
O2
O3
I
O
7pi4 1 P40337 100.0 4e-113 X-RAY
2021-09-29 GLN A:137 AAA:195 104.0 0.578 H -63.3 -49.6 104.0 0.578 0.0 HOH
4.879
N
O
6fmi 3 P40337 99.34 1e-109 X-RAY
2018-04-11 GLN C:144 C:195 92.0 0.511 H -60.0 -42.7 92.0 0.511 0.0 HOH
6.967
O
O
GLN F:144 F:195 80.0 0.444 H -57.2 -44.0 NA NA NA
6fmj 3 P40337 99.34 1e-109 X-RAY
2018-04-11 GLN C:144 C:195 93.0 0.517 H -61.7 -36.6 93.0 0.517 0.0 HOH
3.286
OE1
O
GLN F:144 F:195 86.0 0.478 H -60.5 -39.9 NA NA NA
GLN I:144 I:195 116.0 0.644 H -57.6 -38.5 NA NA NA
GLN L:144 L:195 108.0 0.6 H -61.7 -45.6 NA NA NA
6fmk 3 P40337 99.34 1e-109 X-RAY
2018-04-11 GLN C:144 C:195 101.0 0.561 H -70.8 -29.3 101.0 0.561 0.0 HOH
4.035
OE1
O
GLN F:144 F:195 96.0 0.533 H -59.2 -41.1 NA NA NA
GLN I:144 I:195 92.0 0.511 H -51.5 -40.5 NA NA NA
GLN L:144 L:195 116.0 0.644 H -60.6 -36.6 NA NA NA
6hr2 2 P40337 100.0 3e-108 X-RAY
2019-06-12 GLN B:135 B:195 100.0 0.556 H -59.7 -40.6 100.0 0.556 0.0 HOH
2.221
H
O
GLN F:135 F:195 85.0 0.472 H -59.6 -40.6 NA NA NA
6r6h 12 P40337 100.0 3e-107 EM
2019-08-28 GLN L:136 V:195 80.0 0.444 H -64.3 -20.5 80.0 0.444 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p40337-f1 1 P40337 100.0 2e-156 GLN A:195 A:195 90.0 0.5 H -61.8 -43.8