Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 100815116 . G A CCDS3652.1:NM_021970.3:c.5gCg>gTg_NP_068805.1:p.2A>V Homo sapiens late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 (LAMTOR3), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5y39 3 Q9UHA4 100.0 4e-88 X-RAY
2017-12-06 ALA C:2 NA:NA DO NA DO DO DO NA NA NA
ALA H:2 NA:NA DO NA DO DO DO NA NA NA
5y3a 3 Q9UHA4 100.0 4e-88 X-RAY
2017-12-27 ALA C:2 NA:NA DO NA DO DO DO NA NA NA
ALA H:2 NA:NA DO NA DO DO DO NA NA NA
5yk3 1 Q9UHA4 100.0 4e-88 X-RAY
2019-01-23 ALA A:2 m:2 70.0 0.609 H -58.7 -33.3 13.0 0.113 0.496 E:Q6IAA8:0.496
ALA K:2 H:2 57.0 0.496 H -60.4 -30.8 NA NA NA
6b9x 3 Q9UHA4 100.0 4e-88 X-RAY
2017-11-08 ALA C:2 C:2 103.0 0.896 360.0 118.8 103.0 0.896 0.0 HOH
6.160
CA
O
6nzd 3 Q9UHA4 100.0 4e-88 EM
2019-11-06 ALA C:2 C:2 100.0 0.87 360.0 118.8 100.0 0.87 0.0
6ulg 2 Q9UHA4 100.0 4e-88 EM
2019-11-20 ALA B:2 A:2 111.0 0.965 360.0 -12.3 55.0 0.478 0.487 F:Q6IAA8:0.487
6wj2 3 Q9UHA4 100.0 4e-88 EM
2020-09-02 ALA C:2 NA:NA DO NA DO DO DO NA NA NA
6wj3 3 Q9UHA4 100.0 4e-88 EM
2020-09-02 ALA C:2 NA:NA DO NA DO DO DO NA NA NA
6ehp 1 Q9UHA4 100.0 4e-88 X-RAY
2017-10-04 ALA A:5 A:2 73.0 0.635 H -71.8 -37.1 32.0 0.278 0.357 E:Q6IAA8:0.357
HOH
6.653
O
O
6ehr 1 Q9UHA4 100.0 4e-88 X-RAY
2017-10-04 ALA A:5 NA:NA DO NA DO DO DO NA NA NA
6u62 6 Q9UHA4 100.0 1e-87 EM
2019-10-30 ALA F:2 NA:NA DO NA DO DO DO NA NA NA
5x6u 1 Q9UHA4 100.0 3e-87 X-RAY
2017-12-06 ALA A:5 A:2 48.0 0.417 H -68.5 -31.7 13.0 0.113 0.304 E:Q6IAA8:0.304
HOH
6.846
O
O
5x6v 1 Q9UHA4 100.0 3e-87 X-RAY
2017-12-06 ALA A:5 A:2 90.0 0.783 360.0 -29.2 23.0 0.2 0.583 E:Q6IAA8:0.583
HOH
5.405
CB
O
1sko 1 Q9UHA4 100.0 4e-87 X-RAY
2004-06-01 ALA A:21 A:3 56.0 0.487 H -65.3 -49.1 56.0 0.487 0.0 HOH
3.107
N
O
3cpt 1 Q9UHA4 100.0 4e-87 X-RAY
2008-07-01 ALA A:21 NA:NA DO NA DO DO DO NA NA NA
5yk3 6 Q9UHA4 100.0 2e-86 X-RAY
2019-01-23 ALA F:2 C:2 72.0 0.626 H -59.2 -41.2 NA NA NA
2zl1 1 Q9UHA4 98.37 1e-85 X-RAY
2008-06-24 ALA A:21 A:2 90.0 0.783 360.0 28.6 90.0 0.783 0.0 HOH
3.744
N
O
1vet 1 O88653 97.58 3e-85 X-RAY
2004-08-03 ALA A:2 A:2 161.0 1.0 360.0 25.2 161.0 1.0 0.0 HOH
2.778
CB
O
1veu 1 O88653 97.58 3e-85 X-RAY
2004-08-03 ALA A:2 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9uha4-f1 1 Q9UHA4 100.0 2e-88 ALA A:2 A:2 61.0 0.53 H -58.0 -40.2