Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr4 | 155528089 | . | C | A | CCDS47153.1:NM_000509.4:c.897aaG>aaT_NP_000500.2:p.299K>N | Homo sapiens fibrinogen gamma chain (FGG), transcript variant gamma-A, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 3ghg | 3 | P02679 | 100.0 | 0.0 |
X-RAY |
2009-05-19 | LYS | C:273 | C:273 | 55.0 | 0.275 | T | 69.4 | 37.6 | 55.0 | 0.275 | 0.0 | ||||||
| LYS | F:273 | F:273 | 68.0 | 0.34 | T | 45.8 | 41.9 | 68.0 | 0.34 | 0.0 | |||||||||||||
| LYS | I:273 | I:273 | 58.0 | 0.29 | T | 61.2 | 42.3 | NA | NA | NA | |||||||||||||
| LYS | L:273 | L:273 | 57.0 | 0.285 | T | 56.8 | 43.5 | NA | NA | NA | |||||||||||||
| 1n86 | 3 | 6650830 | 100.0 | 0.0 |
X-RAY |
2003-01-07 | LYS | C:186 | C:273 | 61.0 | 0.305 | T | 49.2 | -146.9 | 61.0 | 0.305 | 0.0 | ||||||
| LYS | F:186 | F:273 | 62.0 | 0.31 | T | 48.1 | -148.1 | 62.0 | 0.31 | 0.0 | |||||||||||||
| 2hlo | 3 | Q53Y18 | 100.0 | 0.0 |
X-RAY |
2007-07-17 | LYS | C:186 | C:273 | 61.0 | 0.305 | T | 42.8 | 38.8 | 61.0 | 0.305 | 0.0 |
HOH |
3.995 |
NZ |
O |
||
| LYS | F:186 | F:273 | 57.0 | 0.285 | T | 57.2 | 36.7 | NA | NA | NA | |||||||||||||
| 2q9i | 3 | Q53Y18 | 100.0 | 0.0 |
X-RAY |
2007-12-11 | LYS | C:186 | C:273 | 61.0 | 0.305 | T | 45.9 | 38.7 | 61.0 | 0.305 | 0.0 | ||||||
| LYS | F:186 | F:273 | 62.0 | 0.31 | T | 48.2 | 39.8 | NA | NA | NA | |||||||||||||
| 2z4e | 3 | Q53Y18 | 100.0 | 0.0 |
X-RAY |
2007-10-23 | LYS | C:186 | C:273 | 56.0 | 0.28 | T | 43.0 | 36.5 | 56.0 | 0.28 | 0.0 | ||||||
| LYS | F:186 | F:273 | 57.0 | 0.285 | T | 35.6 | 44.6 | 57.0 | 0.285 | 0.0 | |||||||||||||
| 2h43 | 3 | P02679 | 100.0 | 0.0 |
X-RAY |
2006-12-05 | LYS | C:185 | C:273 | 61.0 | 0.305 | T | 66.3 | 39.6 | 61.0 | 0.305 | 0.0 | ||||||
| LYS | F:185 | F:273 | 60.0 | 0.3 | T | 71.3 | 42.8 | NA | NA | NA | |||||||||||||
| 2hod | 3 | Q53Y18 | 100.0 | 0.0 |
X-RAY |
2007-05-29 | LYS | C:185 | C:273 | 54.0 | 0.27 | 82.1 | -163.5 | 54.0 | 0.27 | 0.0 | |||||||
| LYS | F:185 | F:273 | 41.0 | 0.205 | T | 71.8 | -129.5 | NA | NA | NA | |||||||||||||
| LYS | I:185 | I:273 | 57.0 | 0.285 | 83.9 | -165.1 | NA | NA | NA | ||||||||||||||
| LYS | L:185 | L:273 | 39.0 | 0.195 | T | 71.9 | -127.2 | NA | NA | NA | |||||||||||||
| 2hpc | 3 | Q53Y18 | 100.0 | 0.0 |
X-RAY |
2007-05-29 | LYS | C:185 | C:273 | 30.0 | 0.15 | 118.8 | -133.8 | 30.0 | 0.15 | 0.0 | |||||||
| LYS | F:185 | F:273 | 44.0 | 0.22 | T | 64.5 | -124.5 | NA | NA | NA | |||||||||||||
| LYS | I:185 | I:273 | 31.0 | 0.155 | 118.8 | -134.6 | NA | NA | NA | ||||||||||||||
| LYS | L:185 | L:273 | 46.0 | 0.23 | T | 64.2 | -127.0 | NA | NA | NA | |||||||||||||
| 1fza | 3 | P02679 | 100.0 | 0.0 |
X-RAY |
1997-12-03 | LYS | C:186 | C:273 | 55.0 | 0.275 | T | 57.7 | 34.9 | 55.0 | 0.275 | 0.0 | ||||||
| LYS | F:186 | F:273 | 55.0 | 0.275 | T | 57.6 | 34.9 | 55.0 | 0.275 | 0.0 | |||||||||||||
| 1fzb | 3 | P02679 | 100.0 | 0.0 |
X-RAY |
1997-12-03 | LYS | C:186 | C:273 | 52.0 | 0.26 | T | 58.2 | 37.0 | 52.0 | 0.26 | 0.0 | ||||||
| LYS | F:186 | F:273 | 50.0 | 0.25 | T | 51.3 | 38.4 | 50.0 | 0.25 | 0.0 | |||||||||||||
| 1fzc | 3 | P02679 | 100.0 | 0.0 |
X-RAY |
1998-10-14 | LYS | C:186 | C:273 | 59.0 | 0.295 | T | 58.8 | -143.5 | 59.0 | 0.295 | 0.0 |
HOH |
3.405 |
CE |
O |
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| LYS | F:186 | F:273 | 55.0 | 0.275 | T | 62.5 | -145.5 | 55.0 | 0.275 | 0.0 |
HOH |
4.906 |
CG |
O |
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| 1fze | 3 | P02679 | 100.0 | 0.0 |
X-RAY |
1999-06-08 | LYS | C:186 | C:273 | 60.0 | 0.3 | T | 47.0 | 33.1 | 60.0 | 0.3 | 0.0 | ||||||
| LYS | F:186 | F:273 | 60.0 | 0.3 | T | 49.1 | 30.7 | 60.0 | 0.3 | 0.0 | |||||||||||||
| 1fzf | 3 | P02679 | 100.0 | 0.0 |
X-RAY |
1999-06-08 | LYS | C:186 | C:273 | 57.0 | 0.285 | T | 51.8 | 43.0 | 57.0 | 0.285 | 0.0 | ||||||
| LYS | F:186 | F:273 | 56.0 | 0.28 | T | 52.6 | 43.6 | 56.0 | 0.28 | 0.0 | |||||||||||||
| 1fzg | 3 | P02679 | 100.0 | 0.0 |
X-RAY |
1999-06-08 | LYS | C:186 | C:273 | 62.0 | 0.31 | T | 56.1 | 42.1 | 62.0 | 0.31 | 0.0 |
HOH |
6.576 |
O |
O |
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| LYS | F:186 | F:273 | 55.0 | 0.275 | T | 55.6 | 34.5 | 55.0 | 0.275 | 0.0 |
HOH |
6.767 |
O |
O |
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| 2xnx | 3 | P02679 | 100.0 | 0.0 |
X-RAY |
2011-04-13 | LYS | C:186 | C:273 | 71.0 | 0.355 | T | 63.9 | 34.5 | 71.0 | 0.355 | 0.0 | ||||||
| LYS | F:186 | F:273 | 58.0 | 0.29 | T | 67.2 | 31.7 | 58.0 | 0.29 | 0.0 | |||||||||||||
| LYS | I:186 | I:273 | 64.0 | 0.32 | T | 62.9 | 37.6 | 64.0 | 0.32 | 0.0 | |||||||||||||
| LYS | L:186 | L:273 | 68.0 | 0.34 | T | 65.8 | 35.0 | 68.0 | 0.34 | 0.0 | |||||||||||||
| 2xny | 3 | P02679 | 100.0 | 0.0 |
X-RAY |
2011-04-13 | LYS | C:186 | C:273 | 63.0 | 0.315 | T | 49.3 | 40.1 | 63.0 | 0.315 | 0.0 | ||||||
| LYS | F:186 | F:273 | 61.0 | 0.305 | T | 49.4 | 40.0 | NA | NA | NA | |||||||||||||
| 3e1i | 3 | P02679 | 100.0 | 0.0 |
X-RAY |
2009-01-13 | LYS | C:186 | C:273 | 62.0 | 0.31 | T | 49.3 | 40.1 | 62.0 | 0.31 | 0.0 |
HOH |
4.388 |
CG |
O |
||
| LYS | F:186 | F:273 | 60.0 | 0.3 | T | 56.1 | 36.3 | NA | NA | NA | |||||||||||||
| 3h32 | 3 | P02679 | 100.0 | 0.0 |
X-RAY |
2009-07-28 | LYS | C:179 | C:273 | 62.0 | 0.31 | T | 66.2 | 47.1 | 62.0 | 0.31 | 0.0 | ||||||
| LYS | F:179 | F:273 | 71.0 | 0.355 | T | 69.3 | 30.7 | 71.0 | 0.355 | 0.0 | |||||||||||||
| 1lt9 | 3 | P02679 | 100.0 | 0.0 |
X-RAY |
2002-11-06 | LYS | C:178 | C:273 | 60.0 | 0.3 | T | 54.1 | 44.9 | 60.0 | 0.3 | 0.0 |
HOH |
2.889 |
NZ |
O |
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| LYS | F:178 | F:273 | 53.0 | 0.265 | T | 62.5 | 37.0 | NA | NA | NA | |||||||||||||
| 1ltj | 3 | P02679 | 100.0 | 0.0 |
X-RAY |
2002-11-06 | LYS | C:178 | C:273 | 58.0 | 0.29 | T | 52.3 | 40.6 | 58.0 | 0.29 | 0.0 |
HOH |
2.681 |
NZ |
O |
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| LYS | F:178 | F:273 | 57.0 | 0.285 | T | 40.1 | 42.5 | NA | NA | NA | |||||||||||||
| 1re3 | 3 | P02679 | 100.0 | 0.0 |
X-RAY |
2004-05-25 | LYS | C:178 | C:273 | 55.0 | 0.275 | T | 56.7 | 35.0 | 55.0 | 0.275 | 0.0 |
HOH |
6.516 |
O |
O |
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| LYS | F:178 | F:273 | 61.0 | 0.305 | T | 57.3 | 36.0 | NA | NA | NA | |||||||||||||
| 1re4 | 3 | P02679 | 100.0 | 0.0 |
X-RAY |
2004-05-25 | LYS | C:178 | C:273 | 62.0 | 0.31 | T | 56.3 | 40.5 | 62.0 | 0.31 | 0.0 |
HOH |
7.390 |
N |
O |
||
| LYS | F:178 | F:273 | 63.0 | 0.315 | T | 46.6 | 42.5 | NA | NA | NA | |||||||||||||
| 2ffd | 3 | P02679 | 100.0 | 0.0 |
X-RAY |
2006-07-04 | LYS | C:178 | C:273 | 60.0 | 0.3 | T | 44.8 | 44.9 | 60.0 | 0.3 | 0.0 |
HOH |
6.506 |
N |
O |
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| LYS | F:178 | F:273 | 59.0 | 0.295 | T | 50.5 | 45.4 | NA | NA | NA | |||||||||||||
| 1rf0 | 3 | P02679 | 99.68 | 0.0 |
X-RAY |
2004-03-16 | LYS | C:178 | C:273 | 54.0 | 0.27 | T | 52.2 | 48.9 | 54.0 | 0.27 | 0.0 |
HOH |
8.294 |
CE |
O |
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| LYS | F:178 | F:273 | 55.0 | 0.275 | T | 58.6 | 41.1 | NA | NA | NA | |||||||||||||
| 1rf1 | 3 | P02679 | 99.68 | 0.0 |
X-RAY |
2004-03-16 | LYS | C:178 | C:273 | 60.0 | 0.3 | T | 50.6 | 42.1 | 60.0 | 0.3 | 0.0 |
HOH |
6.766 |
O |
O |
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| LYS | F:178 | F:273 | 58.0 | 0.29 | T | 51.7 | 40.9 | NA | NA | NA | |||||||||||||
| 3hus | 3 | P02679 | 99.68 | 0.0 |
X-RAY |
2009-08-18 | LYS | C:178 | C:273 | 60.0 | 0.3 | T | 60.0 | 37.8 | 60.0 | 0.3 | 0.0 | ||||||
| LYS | F:178 | F:273 | 62.0 | 0.31 | T | 57.8 | 38.7 | NA | NA | NA | |||||||||||||
| 2oyh | 3 | P02679 | 99.36 | 0.0 |
X-RAY |
2007-05-15 | LYS | C:178 | C:273 | 63.0 | 0.315 | T | 56.5 | 37.6 | 63.0 | 0.315 | 0.0 |
HOH |
6.824 |
O |
O |
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| LYS | F:178 | F:273 | 58.0 | 0.29 | T | 53.5 | 39.0 | NA | NA | NA | |||||||||||||
| 2oyi | 3 | P02679 | 99.36 | 0.0 |
X-RAY |
2007-05-15 | LYS | C:178 | C:273 | 63.0 | 0.315 | T | 49.1 | 35.8 | 63.0 | 0.315 | 0.0 | ||||||
| LYS | F:178 | F:273 | 61.0 | 0.305 | T | 52.2 | 37.1 | NA | NA | NA | |||||||||||||
| 3bvh | 3 | P02679 | 99.66 | 0.0 |
X-RAY |
2008-09-02 | LYS | C:172 | C:273 | 56.0 | 0.28 | T | 59.8 | 35.1 | 56.0 | 0.28 | 0.0 |
HOH |
2.740 |
NZ |
O |
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| LYS | F:172 | F:273 | 62.0 | 0.31 | T | 58.9 | 36.3 | NA | NA | NA | |||||||||||||
| 1fib | 1 | P02679 | 100.0 | 0.0 |
X-RAY |
1997-04-01 | LYS | A:131 | A:273 | 54.0 | 0.27 | T | 49.1 | 43.3 | 54.0 | 0.27 | 0.0 |
HOH |
4.552 |
CG |
O |
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| 1fic | 1 | P02679 | 100.0 | 0.0 |
X-RAY |
1997-04-01 | LYS | A:131 | A:273 | 59.0 | 0.295 | T | 52.7 | 38.6 | 59.0 | 0.295 | 0.0 |
HOH |
6.753 |
O |
O |
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| LYS | B:131 | B:273 | 59.0 | 0.295 | T | 42.9 | 42.8 | 59.0 | 0.295 | 0.0 |
HOH |
4.053 |
NZ |
O |
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| 1fid | 1 | P02679 | 100.0 | 0.0 |
X-RAY |
1997-04-01 | LYS | A:131 | A:273 | 64.0 | 0.32 | T | 49.3 | 45.0 | 64.0 | 0.32 | 0.0 |
HOH |
3.144 |
CE |
O |
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| 2fib | 1 | P02679 | 100.0 | 0.0 |
X-RAY |
1997-10-15 | LYS | A:131 | A:273 | 59.0 | 0.295 | T | 55.6 | 41.0 | 59.0 | 0.295 | 0.0 |
HOH |
4.347 |
CE |
O |
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| 3fib | 1 | P02679 | 100.0 | 0.0 |
X-RAY |
1997-09-17 | LYS | A:130 | A:273 | 54.0 | 0.27 | T | 49.2 | 41.9 | 54.0 | 0.27 | 0.0 |
HOH |
4.817 |
CG |
O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p02679-f1 | 1 | P02679 | 99.77 | 0.0 | LYS | A:299 | A:299 | 60.0 | 0.3 | T | 52.1 | 38.7 | |