Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 132010167 . T A CCDS4158.1:NM_000589.3:c.152tTg>tAg_NP_000580.1:p.51L>* Homo sapiens interleukin 4 (IL4), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4ydy 2 P05112 100.0 1e-92 X-RAY
2015-03-04 LEU B:28 I:27 65.0 0.382 S -61.7 150.4 65.0 0.382 0.0 HOH
3.811
CA
O
LEU D:28 J:27 40.0 0.235 S -66.8 146.2 NA NA NA
1hik 1 P05112 100.0 2e-92 X-RAY
1996-01-29 LEU A:27 A:27 28.0 0.165 S -76.8 158.9 28.0 0.165 0.0 HOH
7.348
O
O
1iar 1 P05112 100.0 2e-92 X-RAY
2000-03-03 LEU A:27 A:27 52.0 0.306 S -61.5 150.4 52.0 0.306 0.0 HOH
3.422
CD2
O
1rcb 1 P05112 100.0 2e-92 X-RAY
1993-10-31 LEU A:27 A:27 33.0 0.194 S -67.5 172.5 33.0 0.194 0.0 HOH
3.840
CD1
O
2b8u 1 P05112 100.0 2e-92 X-RAY
2006-05-30 LEU A:27 A:27 24.0 0.141 S -75.0 166.6 24.0 0.141 0.0 SO4
HOH
3.985
3.643
CB
CA
O4
O
2int 1 P05112 100.0 2e-92 X-RAY
1994-01-31 LEU A:27 A:27 44.0 0.259 S -79.3 167.9 44.0 0.259 0.0
3bpl 1 P05112 100.0 2e-92 X-RAY
2008-02-05 LEU A:27 A:27 38.0 0.224 S -58.5 154.9 38.0 0.224 0.0 HOH
9.666
CD1
O
3bpn 1 P05112 100.0 2e-92 X-RAY
2008-02-05 LEU A:27 A:27 44.0 0.259 S -63.3 162.9 39.0 0.229 0.03 C:P78552:0.029
HOH
6.625
O
O
1hij 1 P05112 99.22 1e-91 X-RAY
1996-01-29 LEU A:27 A:27 37.0 0.218 S -74.5 152.5 37.0 0.218 0.0 HOH
8.581
C
O
1hzi 1 P05112 99.22 1e-91 X-RAY
2001-08-29 LEU A:27 A:27 39.0 0.229 S -65.2 158.6 39.0 0.229 0.0 SO4
SO4
HOH
8.389
3.687
3.669
CD1
CD2
CA
O1
O3
O
2d48 1 P05112 99.22 1e-91 X-RAY
2006-05-30 LEU A:27 A:27 27.0 0.159 S -70.9 161.0 27.0 0.159 0.0 SO4
SO4
HOH
7.769
4.108
3.438
CD1
CB
CD2
O4
O4
O
1bbn 1 P05112 96.21 2e-91 NMR
1993-10-31 LEU A:31 A:31 18.0 0.106 S -135.9 94.4 18.0 0.106 0.0
2b8z 1 P05112 99.22 2e-91 X-RAY
2006-05-30 LEU A:27 A:27 40.0 0.235 S -60.0 159.6 40.0 0.235 0.0 SO4
HOH
4.237
3.705
CD2
CA
O4
O
2b8x 1 P05112 99.22 4e-91 X-RAY
2006-05-30 LEU A:27 A:27 37.0 0.218 S -71.0 162.0 37.0 0.218 0.0 SO4
HOH
3.570
3.211
CD2
N
O1
O
2b90 1 P05112 98.45 1e-90 X-RAY
2006-05-30 LEU A:27 A:27 41.0 0.241 S -62.6 159.2 41.0 0.241 0.0 SO4
HOH
4.027
3.691
CD2
CA
O4
O
2b8y 1 P05112 98.45 2e-90 X-RAY
2006-05-30 LEU A:27 A:27 24.0 0.141 S -72.9 160.6 24.0 0.141 0.0 SO4
HOH
4.136
3.529
CB
CA
O1
O
2b91 1 P05112 98.45 3e-90 X-RAY
2006-05-30 LEU A:27 A:27 42.0 0.247 S -67.7 155.5 42.0 0.247 0.0 SO4
HOH
4.185
3.561
CD2
CA
O4
O
5fhx 1 P05112 100.0 6e-88 X-RAY
2016-03-30 LEU A:22 A:27 19.0 0.112 S -68.7 159.5 19.0 0.112 0.0
6oel 1 P05112 93.8 8e-87 X-RAY
2019-08-07 LEU A:27 A:27 65.0 0.382 S -67.5 166.0 65.0 0.382 0.0
3qb7 1 D4HNR6 93.8 1e-86 X-RAY
2012-04-25 LEU A:30 A:27 42.0 0.247 S -65.5 138.2 42.0 0.247 0.0
LEU B:30 B:27 25.0 0.147 S -58.2 137.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05112-f1 1 P05112 100.0 9e-113 LEU A:51 A:51 46.0 0.271 S -68.0 146.2