Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 132015484 . C A CCDS4158.1:NM_000589.3:c.262Cgc>Agc_NP_000580.1:p.88R>S Homo sapiens interleukin 4 (IL4), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4ydy 2 P05112 100.0 1e-92 X-RAY
 2015-03-04 ARG B:65 I:64 92.0 NA T -58.9 -38.9 92.0 NA NA HOH
 5.181
 N
 O
ARG D:65 J:64 168.0 0.747 H -66.3 -44.3 NA NA NA
1hik 1 P05112 100.0 2e-92 X-RAY
 1996-01-29 ARG A:64 A:64 159.0 0.707 H -71.0 -16.4 159.0 0.707 0.0 HOH
 3.590
 C
 O
1iar 1 P05112 100.0 2e-92 X-RAY
 2000-03-03 ARG A:64 A:64 171.0 0.76 G -62.0 -19.2 171.0 0.76 0.0 HOH
 2.410
 NH2
 O
1rcb 1 P05112 100.0 2e-92 X-RAY
 1993-10-31 ARG A:64 A:64 150.0 0.667 T -68.4 -15.0 150.0 0.667 0.0 HOH
 3.187
 O
 O
2b8u 1 P05112 100.0 2e-92 X-RAY
 2006-05-30 ARG A:64 A:64 127.0 0.564 H -69.0 -22.7 127.0 0.564 0.0 SO4
HOH
 3.036
3.225
 NH2
O
 O2
O
2int 1 P05112 100.0 2e-92 X-RAY
 1994-01-31 ARG A:64 A:64 141.0 0.627 T -68.9 -21.2 141.0 0.627 0.0
3bpl 1 P05112 100.0 2e-92 X-RAY
 2008-02-05 ARG A:64 A:64 151.0 0.671 T -45.6 -58.6 151.0 0.671 0.0 HOH
 5.271
 N
 O
3bpn 1 P05112 100.0 2e-92 X-RAY
 2008-02-05 ARG A:64 A:64 183.0 0.813 H -56.5 -36.0 152.0 0.676 0.137 C:P78552:0.138
1hij 1 P05112 99.22 1e-91 X-RAY
 1996-01-29 ARG A:64 A:64 146.0 0.649 H -67.8 -6.9 146.0 0.649 0.0 HOH
 3.724
 C
 O
1hzi 1 P05112 99.22 1e-91 X-RAY
 2001-08-29 ARG A:64 A:64 144.0 0.64 T -74.0 -21.2 144.0 0.64 0.0 SO4
SO4
HOH
 5.131
2.895
3.728
 N
NH2
O
 O3
O3
O
2d48 1 P05112 99.22 1e-91 X-RAY
 2006-05-30 ARG A:64 A:64 129.0 0.573 T -70.9 -21.3 129.0 0.573 0.0 SO4
SO4
HOH
 5.070
2.922
2.957
 NH2
NH1
O
 O4
O3
O
1bbn 1 P05112 96.21 2e-91 NMR
 1993-10-31 ARG A:68 A:68 161.0 0.716 H -52.4 -63.7 161.0 0.716 0.0
2b8z 1 P05112 99.22 2e-91 X-RAY
 2006-05-30 ARG A:64 A:64 149.0 0.662 T -68.6 -16.9 149.0 0.662 0.0 SO4
HOH
 2.938
2.947
 NH1
NH1
 O4
O
2b8x 1 P05112 99.22 4e-91 X-RAY
 2006-05-30 ARG A:64 A:64 139.0 0.618 T -71.1 -18.4 139.0 0.618 0.0 SO4
HOH
 2.792
3.681
 NH2
O
 O1
O
2b90 1 P05112 98.45 1e-90 X-RAY
 2006-05-30 ARG A:64 A:64 149.0 0.662 T -73.2 -20.2 149.0 0.662 0.0 SO4
HOH
 2.738
2.944
 NH1
NH1
 O4
O
2b8y 1 P05112 98.45 2e-90 X-RAY
 2006-05-30 ARG A:64 A:64 127.0 0.564 T -72.2 -18.9 127.0 0.564 0.0 SO4
HOH
 2.984
3.044
 NH1
O
 O2
O
2b91 1 P05112 98.45 3e-90 X-RAY
 2006-05-30 ARG A:64 A:64 148.0 0.658 T -71.1 -21.6 148.0 0.658 0.0 SO4
HOH
 2.712
3.575
 NH2
O
 O3
O
5fhx 1 P05112 100.0 6e-88 X-RAY
 2016-03-30 ARG A:59 A:64 154.0 0.684 H -69.4 -18.6 154.0 0.684 0.0 HOH
 8.795
 C
 O
6oel 1 P05112 93.8 8e-87 X-RAY
 2019-08-07 ARG A:64 A:64 174.0 0.773 T -68.4 -28.2 174.0 0.773 0.0
3qb7 1 D4HNR6 93.8 1e-86 X-RAY
 2012-04-25 ARG A:67 A:64 194.0 0.862 T -55.2 -39.2 148.0 0.658 0.204 D:P31785:0.204
ARG B:67 B:64 160.0 0.711 T -60.5 -19.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05112-f1 1 P05112 100.0 9e-113 ARG A:88 A:88 157.0 0.698 H -67.5 -25.5