Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 42977066 . G A CCDS4878.1:NM_006245.3:c.1258Gag>Aag_NP_006236.1:p.420E>K Homo sapiens protein phosphatase 2 regulatory subunit B'delta (PPP2R5D), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2npp 2 Q13362 87.89 0.0 X-RAY
 2006-12-12 GLU B:344 B:334 82.0 0.432 H -54.7 -71.2 NA NA NA
GLU E:344 E:334 81.0 0.426 H -52.8 -75.9 81.0 0.426 0.0
2iae 2 Q13362 88.21 0.0 X-RAY
 2006-12-26 GLU B:315 B:344 67.0 0.353 H -67.7 -56.1 67.0 0.353 0.0
GLU E:315 E:344 22.0 NA H -53.2 -34.7 NA NA NA
3fga 2 Q13362 88.83 0.0 X-RAY
 2009-09-22 GLU B:311 B:334 73.0 0.384 H -53.2 -58.2 73.0 0.384 0.0
2nyl 2 Q13362 90.93 0.0 X-RAY
 2006-12-12 GLU B:307 B:334 69.0 0.363 H -70.1 -43.9 69.0 0.363 0.0
GLU E:307 E:334 65.0 0.342 H -60.0 -55.3 NA NA NA
2nym 2 Q13362 90.93 0.0 X-RAY
 2006-12-12 GLU B:307 B:334 69.0 0.363 H -50.8 -49.6 69.0 0.363 0.0
GLU E:307 E:334 69.0 0.363 H -49.0 -62.8 NA NA NA
5jja 1 Q13362 88.64 0.0 X-RAY
 2016-07-13 GLU A:316 A:344 68.0 0.358 H -62.2 -44.9 68.0 0.358 0.0 HOH
 6.479
 N
 O
GLU B:316 B:344 66.0 0.347 H -61.7 -41.6 NA NA NA
6toq 2 Q13362 88.89 0.0 X-RAY
 2020-10-21 GLU B:334 AAA:344 104.0 0.547 H -51.8 -44.9 104.0 0.547 0.0 HOH
 8.273
 N
 O
2jak 1 Q13362 88.89 0.0 X-RAY
 2006-12-04 GLU A:356 A:344 96.0 0.505 H -57.3 -45.9 96.0 0.505 0.0
5k6s 1 Q13362 89.14 0.0 X-RAY
 2016-12-07 GLU A:319 A:344 106.0 0.558 H -58.9 -39.6 106.0 0.558 0.0
5sw9 1 Q13362 89.14 0.0 X-RAY
 2016-11-30 GLU A:319 A:344 107.0 0.563 H -61.6 -39.7 107.0 0.563 0.0 HOH
 7.537
 OE1
 O
5swf 1 Q13362 89.14 0.0 X-RAY
 2016-11-30 GLU A:319 A:344 101.0 0.532 H -57.8 -40.7 101.0 0.532 0.0 HOH
 8.330
 O
 O
6oyl 1 Q13362 89.14 0.0 X-RAY
 2020-03-25 GLU A:319 A:344 107.0 0.563 H -52.1 -41.1 107.0 0.563 0.0 HOH
 5.306
 CD
 O
6vro 1 Q13362 89.14 0.0 X-RAY
 2020-03-25 GLU A:319 A:344 64.0 0.337 H -58.7 -43.3 64.0 0.337 0.0 HOH
 7.068
 OE1
 O
7ouf 2 O75475,Q13362 88.89 0.0 EM
 2021-08-18 GLU C:661 NA:NA DO NA DO DO DO NA NA NA
GLU H:661 NA:NA DO NA DO DO DO NA NA NA
7oug 2 O75475,Q13362 88.89 0.0 EM
 2021-08-18 GLU C:661 NA:NA DO NA DO DO DO NA NA NA
GLU H:661 NA:NA DO NA DO DO DO NA NA NA
7ouh 2 ? 88.89 0.0 EM
 2021-08-18 GLU C:661 NA:NA DO NA DO DO DO NA NA NA
GLU H:661 NA:NA DO NA DO DO DO NA NA NA
7pel 2 O75475,Q13362 88.89 0.0 EM
 2021-08-25 GLU C:661 NA:NA DO NA DO DO DO NA NA NA
GLU H:661 NA:NA DO NA DO DO DO NA NA NA
6voy 2 Q13362 89.21 0.0 EM
 2020-07-01 GLU E:315 E:344 80.0 0.421 H -136.5 6.3 77.0 0.405 0.016 D:P39476+A0A1Y1CAW1:0.016
GLU F:315 F:344 78.0 0.411 H -136.5 6.3 75.0 0.395 0.016 B:P39476+A0A1Y1CAW1:0.016

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14738-f1 1 Q14738 100.0 0.0 GLU A:420 A:420 49.0 0.258 H -59.1 -52.2
af-q13362-f1 1 Q13362 81.45 0.0 GLU A:344 A:344 53.0 0.279 H -58.4 -51.3