Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 123715088 . A C CCDS6826.1:NM_001735.2:c.4960Tgt>Ggt_NP_001726.2:p.1654C>G Homo sapiens complement C5 (C5), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3prx 1 P01031 100.0 0.0 X-RAY
2011-01-19 CYS A:1654 A:1654 43.0 0.319 -166.8 39.7 43.0 0.319 0.0
CYS C:1654 C:1654 44.0 0.326 -167.2 40.3 NA NA NA
3pvm 1 P01031 100.0 0.0 X-RAY
2011-01-19 CYS A:1654 A:1654 50.0 0.37 174.4 41.3 50.0 0.37 0.0
CYS C:1654 C:1654 50.0 0.37 173.1 41.1 NA NA NA
5i5k 1 P01031 100.0 0.0 X-RAY
2016-03-16 CYS A:1654 B:1654 42.0 0.311 -86.4 159.9 42.0 0.311 0.0
CYS D:1654 A:1654 40.0 0.296 -87.7 159.9 NA NA NA
7ad6 1 P01031 100.0 0.0 X-RAY
2021-03-10 CYS A:1654 A:1654 51.0 0.378 S -111.6 38.1 51.0 0.378 0.0
CYS B:1654 NA:NA DO NA DO DO DO NA NA NA
7ad7 1 P01031 100.0 0.0 X-RAY
2021-03-10 CYS A:1654 NA:NA DO NA DO DO DO NA NA NA
CYS B:1654 NA:NA DO NA DO DO DO NA NA NA
3cu7 1 P01031 99.94 0.0 X-RAY
2008-06-10 CYS A:1654 A:1654 67.0 0.496 S -136.9 -89.2 67.0 0.496 0.0
CYS B:1654 NA:NA DO NA DO DO DO NA NA NA
3kls 1 P01031 99.94 0.0 X-RAY
2009-11-24 CYS A:1654 A:1654 28.0 0.207 S -166.6 133.4 28.0 0.207 0.0
CYS C:1654 NA:NA DO NA DO DO DO NA NA NA
3km9 1 P01031 99.94 0.0 X-RAY
2009-12-01 CYS A:1654 NA:NA DO NA DO DO DO NA NA NA
CYS C:1654 NA:NA DO NA DO DO DO NA NA NA
4e0s 1 P01031 99.94 0.0 X-RAY
2012-04-18 CYS A:1654 A:1654 60.0 0.444 S -73.4 69.6 60.0 0.444 0.0
7nyc 6 P01031 100.0 0.0 EM
2021-10-06 CYS G:1636 A:1636 112.0 NA G -77.7 -8.6 112.0 NA NA
7nyd 7 P01031 100.0 0.0 EM
2021-10-06 CYS H:1636 A:1636 97.0 NA S -63.4 -38.0 97.0 NA NA
6i2x 2 P01031 100.0 0.0 ELECTRON CRYSTALLOGRAPHY
2019-06-26 CYS B:977 NA:NA DO NA DO DO DO NA NA NA
6rqj 1 P01031 100.0 0.0 EM
2020-01-08 CYS A:977 A:1654 29.0 0.215 T -78.4 -30.5 29.0 0.215 0.0
5hcc 2 P01031 100.0 0.0 X-RAY
2016-03-30 CYS B:976 A:1654 30.0 0.222 S -92.1 31.3 30.0 0.222 0.0
5hcd 2 P01031 100.0 0.0 X-RAY
2016-03-30 CYS B:976 A:1654 34.0 0.252 S -92.8 30.4 34.0 0.252 0.0
5hce 2 P01031 100.0 0.0 X-RAY
2016-03-30 CYS B:976 A:1654 32.0 0.237 S -89.1 28.7 32.0 0.237 0.0
4a5w 1 P01031 100.0 0.0 X-RAY
2012-03-14 CYS A:1558 A:1654 67.0 0.496 -87.6 117.3 67.0 0.496 0.0
6h03 1 P01031 100.0 0.0 EM
2018-12-19 CYS A:1558 NA:NA DO NA DO DO DO NA NA NA
6h04 2 P01031 100.0 0.0 EM
2018-12-19 CYS S:1558 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01031-f1 1 P01031 100.0 0.0 CYS A:1654 A:1654 57.0 0.422 S -101.4 144.9