Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 123724956 . G A CCDS6826.1:NM_001735.2:c.4497caC>caT_NP_001726.2:p.1499H>H Homo sapiens complement C5 (C5), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3prx 1 P01031 100.0 0.0 X-RAY
2011-01-19 HIS A:1499 A:1499 1.0 0.005 T -90.3 28.7 1.0 0.005 0.0
HIS C:1499 C:1499 1.0 0.005 T -91.1 28.0 NA NA NA
3pvm 1 P01031 100.0 0.0 X-RAY
2011-01-19 HIS A:1499 A:1499 0.0 0.0 T -89.0 16.6 0.0 0.0 0.0
HIS C:1499 C:1499 0.0 0.0 T -92.4 18.3 NA NA NA
5i5k 1 P01031 100.0 0.0 X-RAY
2016-03-16 HIS A:1499 B:1499 1.0 0.005 S -80.8 -13.6 1.0 0.005 0.0
HIS D:1499 A:1499 0.0 0.0 S -78.4 -13.4 NA NA NA
7ad6 1 P01031 100.0 0.0 X-RAY
2021-03-10 HIS A:1499 A:1499 5.0 0.026 S -89.3 -9.9 5.0 0.026 0.0
HIS B:1499 NA:NA DO NA DO DO DO NA NA NA
7ad7 1 P01031 100.0 0.0 X-RAY
2021-03-10 HIS A:1499 NA:NA DO NA DO DO DO NA NA NA
HIS B:1499 A:1499 10.0 0.051 T -90.4 -6.3 10.0 0.051 0.0 MPD
HOH
8.865
2.809
N
N
O4
O
3cu7 1 P01031 99.94 0.0 X-RAY
2008-06-10 HIS A:1499 A:1499 5.0 0.026 T -90.0 1.9 5.0 0.026 0.0
HIS B:1499 B:1499 6.0 0.031 T -89.8 1.8 NA NA NA
3kls 1 P01031 99.94 0.0 X-RAY
2009-11-24 HIS A:1499 A:1499 10.0 0.051 T -80.6 -14.2 10.0 0.051 0.0
HIS C:1499 B:1499 10.0 0.051 S -80.5 -15.4 NA NA NA
3km9 1 P01031 99.94 0.0 X-RAY
2009-12-01 HIS A:1499 A:1499 3.0 0.015 T -78.0 -22.7 3.0 0.015 0.0
HIS C:1499 B:1499 3.0 0.015 T -76.8 -24.1 NA NA NA
4e0s 1 P01031 99.94 0.0 X-RAY
2012-04-18 HIS A:1499 A:1499 138.0 0.708 T -90.8 11.6 138.0 0.708 0.0
7nyc 6 P01031 100.0 0.0 EM
2021-10-06 HIS G:1481 A:1481 128.0 0.656 T -80.9 -10.5 128.0 0.656 0.0
7nyd 7 P01031 100.0 0.0 EM
2021-10-06 HIS H:1481 A:1481 125.0 0.641 T -80.4 -11.1 125.0 0.641 0.0
6i2x 2 P01031 100.0 0.0 ELECTRON CRYSTALLOGRAPHY
2019-06-26 HIS B:822 A:1499 9.0 0.046 S -94.4 -14.0 9.0 0.046 0.0
6rqj 1 P01031 100.0 0.0 EM
2020-01-08 HIS A:822 A:1499 2.0 0.01 S -95.2 16.4 2.0 0.01 0.0
5hcc 2 P01031 100.0 0.0 X-RAY
2016-03-30 HIS B:821 A:1499 7.0 0.036 T -91.0 0.6 7.0 0.036 0.0 EDO
HOH
9.478
3.462
O
O
O2
O
5hcd 2 P01031 100.0 0.0 X-RAY
2016-03-30 HIS B:821 A:1499 7.0 0.036 T -91.1 0.9 7.0 0.036 0.0
5hce 2 P01031 100.0 0.0 X-RAY
2016-03-30 HIS B:821 A:1499 7.0 0.036 T -90.9 -1.8 7.0 0.036 0.0
4a5w 1 P01031 100.0 0.0 X-RAY
2012-03-14 HIS A:1403 A:1499 173.0 0.887 S -66.2 -53.1 173.0 0.887 0.0
6h03 1 P01031 100.0 0.0 EM
2018-12-19 HIS A:1403 NA:NA DO NA DO DO DO NA NA NA
6h04 2 P01031 100.0 0.0 EM
2018-12-19 HIS S:1403 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01031-f1 1 P01031 100.0 0.0 HIS A:1499 A:1499 7.0 0.036 T -82.1 -6.7