Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 123725021 . G A CCDS6826.1:NM_001735.2:c.4432Cgg>Tgg_NP_001726.2:p.1478R>W Homo sapiens complement C5 (C5), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3prx 1 P01031 100.0 0.0 X-RAY
2011-01-19 ARG A:1478 A:1478 74.0 0.329 E -65.6 145.8 74.0 0.329 0.0
ARG C:1478 C:1478 73.0 0.324 E -67.9 144.5 NA NA NA
3pvm 1 P01031 100.0 0.0 X-RAY
2011-01-19 ARG A:1478 A:1478 66.0 0.293 E -71.9 150.1 66.0 0.293 0.0
ARG C:1478 C:1478 65.0 0.289 E -72.0 148.9 NA NA NA
5i5k 1 P01031 100.0 0.0 X-RAY
2016-03-16 ARG A:1478 B:1478 101.0 0.449 E -71.5 158.4 101.0 0.449 0.0
ARG D:1478 A:1478 98.0 0.436 E -78.5 152.5 NA NA NA
7ad6 1 P01031 100.0 0.0 X-RAY
2021-03-10 ARG A:1478 A:1478 74.0 0.329 E -80.7 150.9 74.0 0.329 0.0 EDO
CYS
8.743
9.820
N
NH1
O1
C
ARG B:1478 NA:NA DO NA DO DO DO NA NA NA
7ad7 1 P01031 100.0 0.0 X-RAY
2021-03-10 ARG A:1478 NA:NA DO NA DO DO DO NA NA NA
ARG B:1478 A:1478 87.0 0.387 E -67.2 157.0 87.0 0.387 0.0 CYS
HOH
8.977
5.946
NH2
N
O
O
3cu7 1 P01031 99.94 0.0 X-RAY
2008-06-10 ARG A:1478 A:1478 79.0 0.351 E -86.0 164.2 79.0 0.351 0.0
ARG B:1478 B:1478 81.0 0.36 E -86.2 164.3 NA NA NA
3kls 1 P01031 99.94 0.0 X-RAY
2009-11-24 ARG A:1478 A:1478 123.0 0.547 E -99.2 158.0 123.0 0.547 0.0 CD
9.954
NH2
CD
ARG C:1478 B:1478 125.0 0.556 E -101.3 157.4 NA NA NA
3km9 1 P01031 99.94 0.0 X-RAY
2009-12-01 ARG A:1478 A:1478 113.0 0.502 E -110.5 161.3 113.0 0.502 0.0 CD
9.427
NH1
CD
ARG C:1478 B:1478 127.0 0.564 E -107.8 161.8 NA NA NA
4e0s 1 P01031 99.94 0.0 X-RAY
2012-04-18 ARG A:1478 A:1478 70.0 0.311 E -83.6 148.7 70.0 0.311 0.0
7nyc 6 P01031 100.0 0.0 EM
2021-10-06 ARG G:1460 A:1460 106.0 0.471 E -123.9 150.7 106.0 0.471 0.0
7nyd 7 P01031 100.0 0.0 EM
2021-10-06 ARG H:1460 A:1460 109.0 0.484 E -124.0 148.5 109.0 0.484 0.0
6i2x 2 P01031 100.0 0.0 ELECTRON CRYSTALLOGRAPHY
2019-06-26 ARG B:801 A:1478 84.0 0.373 E -83.9 156.1 82.0 0.364 0.009 A:P01031:0.009
H1H
7.135
NH1
C29
6rqj 1 P01031 100.0 0.0 EM
2020-01-08 ARG A:801 A:1478 104.0 0.462 E -65.9 145.3 99.0 0.44 0.022 D:P01031:0.022
5hcc 2 P01031 100.0 0.0 X-RAY
2016-03-30 ARG B:800 A:1478 112.0 0.498 E -70.9 153.3 112.0 0.498 0.0 CYS
HOH
9.425
8.590
NH2
C
CA
O
5hcd 2 P01031 100.0 0.0 X-RAY
2016-03-30 ARG B:800 A:1478 112.0 0.498 E -70.8 153.3 112.0 0.498 0.0 CYS
9.432
NH2
CA
5hce 2 P01031 100.0 0.0 X-RAY
2016-03-30 ARG B:800 A:1478 109.0 0.484 E -70.7 153.0 109.0 0.484 0.0 CYS
9.444
NH2
CA
4a5w 1 P01031 100.0 0.0 X-RAY
2012-03-14 ARG A:1382 A:1478 75.0 0.333 E -98.4 144.1 75.0 0.333 0.0
6h03 1 P01031 100.0 0.0 EM
2018-12-19 ARG A:1382 NA:NA DO NA DO DO DO NA NA NA
6h04 2 P01031 100.0 0.0 EM
2018-12-19 ARG S:1382 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01031-f1 1 P01031 100.0 0.0 ARG A:1478 A:1478 44.0 0.196 E -71.5 151.4