Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr9 | 123725021 | . | G | A | CCDS6826.1:NM_001735.2:c.4432Cgg>Tgg_NP_001726.2:p.1478R>W | Homo sapiens complement C5 (C5), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
3prx | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2011-01-19 | ARG | A:1478 | A:1478 | 74.0 | 0.329 | E | -65.6 | 145.8 | 74.0 | 0.329 | 0.0 | ||||||
ARG | C:1478 | C:1478 | 73.0 | 0.324 | E | -67.9 | 144.5 | NA | NA | NA | |||||||||||||
3pvm | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2011-01-19 | ARG | A:1478 | A:1478 | 66.0 | 0.293 | E | -71.9 | 150.1 | 66.0 | 0.293 | 0.0 | ||||||
ARG | C:1478 | C:1478 | 65.0 | 0.289 | E | -72.0 | 148.9 | NA | NA | NA | |||||||||||||
5i5k | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2016-03-16 | ARG | A:1478 | B:1478 | 101.0 | 0.449 | E | -71.5 | 158.4 | 101.0 | 0.449 | 0.0 | ||||||
ARG | D:1478 | A:1478 | 98.0 | 0.436 | E | -78.5 | 152.5 | NA | NA | NA | |||||||||||||
7ad6 | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2021-03-10 | ARG | A:1478 | A:1478 | 74.0 | 0.329 | E | -80.7 | 150.9 | 74.0 | 0.329 | 0.0 |
EDO CYS |
8.743 9.820 |
N NH1 |
O1 C |
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ARG | B:1478 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
7ad7 | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2021-03-10 | ARG | A:1478 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
ARG | B:1478 | A:1478 | 87.0 | 0.387 | E | -67.2 | 157.0 | 87.0 | 0.387 | 0.0 |
CYS HOH |
8.977 5.946 |
NH2 N |
O O |
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3cu7 | 1 | P01031 | 99.94 | 0.0 |
X-RAY |
2008-06-10 | ARG | A:1478 | A:1478 | 79.0 | 0.351 | E | -86.0 | 164.2 | 79.0 | 0.351 | 0.0 | ||||||
ARG | B:1478 | B:1478 | 81.0 | 0.36 | E | -86.2 | 164.3 | NA | NA | NA | |||||||||||||
3kls | 1 | P01031 | 99.94 | 0.0 |
X-RAY |
2009-11-24 | ARG | A:1478 | A:1478 | 123.0 | 0.547 | E | -99.2 | 158.0 | 123.0 | 0.547 | 0.0 |
CD |
9.954 |
NH2 |
CD |
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ARG | C:1478 | B:1478 | 125.0 | 0.556 | E | -101.3 | 157.4 | NA | NA | NA | |||||||||||||
3km9 | 1 | P01031 | 99.94 | 0.0 |
X-RAY |
2009-12-01 | ARG | A:1478 | A:1478 | 113.0 | 0.502 | E | -110.5 | 161.3 | 113.0 | 0.502 | 0.0 |
CD |
9.427 |
NH1 |
CD |
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ARG | C:1478 | B:1478 | 127.0 | 0.564 | E | -107.8 | 161.8 | NA | NA | NA | |||||||||||||
4e0s | 1 | P01031 | 99.94 | 0.0 |
X-RAY |
2012-04-18 | ARG | A:1478 | A:1478 | 70.0 | 0.311 | E | -83.6 | 148.7 | 70.0 | 0.311 | 0.0 | ||||||
7nyc | 6 | P01031 | 100.0 | 0.0 |
EM |
2021-10-06 | ARG | G:1460 | A:1460 | 106.0 | 0.471 | E | -123.9 | 150.7 | 106.0 | 0.471 | 0.0 | ||||||
7nyd | 7 | P01031 | 100.0 | 0.0 |
EM |
2021-10-06 | ARG | H:1460 | A:1460 | 109.0 | 0.484 | E | -124.0 | 148.5 | 109.0 | 0.484 | 0.0 | ||||||
6i2x | 2 | P01031 | 100.0 | 0.0 |
ELECTRON CRYSTALLOGRAPHY |
2019-06-26 | ARG | B:801 | A:1478 | 84.0 | 0.373 | E | -83.9 | 156.1 | 82.0 | 0.364 | 0.009 |
A:P01031:0.009 |
H1H |
7.135 |
NH1 |
C29 |
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6rqj | 1 | P01031 | 100.0 | 0.0 |
EM |
2020-01-08 | ARG | A:801 | A:1478 | 104.0 | 0.462 | E | -65.9 | 145.3 | 99.0 | 0.44 | 0.022 |
D:P01031:0.022 |
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5hcc | 2 | P01031 | 100.0 | 0.0 |
X-RAY |
2016-03-30 | ARG | B:800 | A:1478 | 112.0 | 0.498 | E | -70.9 | 153.3 | 112.0 | 0.498 | 0.0 |
CYS HOH |
9.425 8.590 |
NH2 C |
CA O |
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5hcd | 2 | P01031 | 100.0 | 0.0 |
X-RAY |
2016-03-30 | ARG | B:800 | A:1478 | 112.0 | 0.498 | E | -70.8 | 153.3 | 112.0 | 0.498 | 0.0 |
CYS |
9.432 |
NH2 |
CA |
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5hce | 2 | P01031 | 100.0 | 0.0 |
X-RAY |
2016-03-30 | ARG | B:800 | A:1478 | 109.0 | 0.484 | E | -70.7 | 153.0 | 109.0 | 0.484 | 0.0 |
CYS |
9.444 |
NH2 |
CA |
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4a5w | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2012-03-14 | ARG | A:1382 | A:1478 | 75.0 | 0.333 | E | -98.4 | 144.1 | 75.0 | 0.333 | 0.0 | ||||||
6h03 | 1 | P01031 | 100.0 | 0.0 |
EM |
2018-12-19 | ARG | A:1382 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
6h04 | 2 | P01031 | 100.0 | 0.0 |
EM |
2018-12-19 | ARG | S:1382 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p01031-f1 | 1 | P01031 | 100.0 | 0.0 | ARG | A:1478 | A:1478 | 44.0 | 0.196 | E | -71.5 | 151.4 |