Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 123737116 . T A CCDS6826.1:NM_001735.2:c.3958Aaa>Taa_NP_001726.2:p.1320K>* Homo sapiens complement C5 (C5), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3prx 1 P01031 100.0 0.0 X-RAY
2011-01-19 LYS A:1320 A:1320 123.0 0.615 S -53.2 160.2 123.0 0.615 0.0
LYS C:1320 C:1320 122.0 0.61 S -55.3 160.4 NA NA NA
3pvm 1 P01031 100.0 0.0 X-RAY
2011-01-19 LYS A:1320 A:1320 127.0 0.635 S -73.6 172.5 127.0 0.635 0.0
LYS C:1320 C:1320 128.0 0.64 S -73.3 172.4 NA NA NA
5i5k 1 P01031 100.0 0.0 X-RAY
2016-03-16 LYS A:1320 B:1320 123.0 0.615 S -77.9 178.2 123.0 0.615 0.0
LYS D:1320 A:1320 125.0 0.625 S -77.5 178.9 NA NA NA
7ad6 1 P01031 100.0 0.0 X-RAY
2021-03-10 LYS A:1320 A:1320 107.0 0.535 S -125.6 -171.6 107.0 0.535 0.0
LYS B:1320 NA:NA DO NA DO DO DO NA NA NA
7ad7 1 P01031 100.0 0.0 X-RAY
2021-03-10 LYS A:1320 NA:NA DO NA DO DO DO NA NA NA
LYS B:1320 A:1320 125.0 0.625 S -78.8 -163.7 125.0 0.625 0.0
3cu7 1 P01031 99.94 0.0 X-RAY
2008-06-10 LYS A:1320 A:1320 124.0 0.62 S -68.8 171.3 124.0 0.62 0.0
LYS B:1320 B:1320 125.0 0.625 S -68.8 171.0 NA NA NA
3kls 1 P01031 99.94 0.0 X-RAY
2009-11-24 LYS A:1320 A:1320 123.0 0.615 S -65.5 150.5 123.0 0.615 0.0
LYS C:1320 B:1320 122.0 0.61 S -65.1 151.5 NA NA NA
3km9 1 P01031 99.94 0.0 X-RAY
2009-12-01 LYS A:1320 A:1320 121.0 0.605 S -57.2 146.7 121.0 0.605 0.0
LYS C:1320 B:1320 119.0 0.595 S -59.3 147.7 NA NA NA
4e0s 1 P01031 99.94 0.0 X-RAY
2012-04-18 LYS A:1320 A:1320 127.0 0.635 S -68.1 -178.9 127.0 0.635 0.0
7nyc 6 P01031 100.0 0.0 EM
2021-10-06 LYS G:1302 A:1302 112.0 0.56 S -81.7 174.4 112.0 0.56 0.0
7nyd 7 P01031 100.0 0.0 EM
2021-10-06 LYS H:1302 A:1302 118.0 0.59 S -77.9 -171.0 118.0 0.59 0.0
6i2x 2 P01031 100.0 0.0 ELECTRON CRYSTALLOGRAPHY
2019-06-26 LYS B:643 A:1320 117.0 0.585 S -165.0 169.9 117.0 0.585 0.0
6rqj 1 P01031 100.0 0.0 EM
2020-01-08 LYS A:643 A:1320 104.0 0.52 S -156.2 -166.0 104.0 0.52 0.0
5hcc 2 P01031 100.0 0.0 X-RAY
2016-03-30 LYS B:642 A:1320 114.0 0.57 S -163.4 -179.5 114.0 0.57 0.0 HOH
8.578
CG
O
5hcd 2 P01031 100.0 0.0 X-RAY
2016-03-30 LYS B:642 A:1320 115.0 0.575 S -163.6 -179.0 115.0 0.575 0.0
5hce 2 P01031 100.0 0.0 X-RAY
2016-03-30 LYS B:642 A:1320 117.0 0.585 S -165.4 -179.7 117.0 0.585 0.0
4a5w 1 P01031 100.0 0.0 X-RAY
2012-03-14 LYS A:1224 A:1320 117.0 0.585 S -128.0 172.0 117.0 0.585 0.0
6h03 1 P01031 100.0 0.0 EM
2018-12-19 LYS A:1224 A:1320 123.0 0.615 S -131.5 -176.6 123.0 0.615 0.0
6h04 2 P01031 100.0 0.0 EM
2018-12-19 LYS S:1224 A:1320 121.0 0.605 S -131.3 -176.6 121.0 0.605 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01031-f1 1 P01031 100.0 0.0 LYS A:1320 A:1320 113.0 0.565 T -99.2 8.0